| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G303135_T01 |
| Family | GT47 |
| Protein Properties | Length: 477 Molecular Weight: 52818 Isoelectric Point: 9.5281 |
| Chromosome | Chromosome/Scaffold: 2 Start: 16233441 End: 16235145 |
| Description | glycosyltransferase 18 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 73 | 405 | 0 |
| GGLVYVYDLPEAFNEDLLGMCDALAPMYSLCPYLANDGLGFPAGGTNLSSLLPRQLLGSWYASDQFALEHIVHRRLLSHRCRTTDPGRAAAFFVPFYAGL AVGRHLWAANATGADRDRDCVALLSWLHAQPWYRRSHGWDHFIALGRITWDFRRTTDAGWGGSFLTMPGVANITRLVIERDPWDGMDVGIPYPTGFHPRT AADVRAWQRYVARRPRPRLFAFAGAPRSAIKGDFRALLLEECQAAGACGALDCAEGRCIKNNALVMELFMGARFCLQPRGDSFTRRSLFDCLVAGAVPVL FWRRSAYLQYGWYLPVDGREGEWSVFIDRDQLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 477 Download |
| MALVRPEHPN PAARRPRLVV LLLLAFFALQ LLVFVAFRAV RPPPAPPSAS AAAVPVLASV 60 PTHRDENDSR CGGGLVYVYD LPEAFNEDLL GMCDALAPMY SLCPYLANDG LGFPAGGTNL 120 SSLLPRQLLG SWYASDQFAL EHIVHRRLLS HRCRTTDPGR AAAFFVPFYA GLAVGRHLWA 180 ANATGADRDR DCVALLSWLH AQPWYRRSHG WDHFIALGRI TWDFRRTTDA GWGGSFLTMP 240 GVANITRLVI ERDPWDGMDV GIPYPTGFHP RTAADVRAWQ RYVARRPRPR LFAFAGAPRS 300 AIKGDFRALL LEECQAAGAC GALDCAEGRC IKNNALVMEL FMGARFCLQP RGDSFTRRSL 360 FDCLVAGAVP VLFWRRSAYL QYGWYLPVDG REGEWSVFID RDQLRAGNLT VRGVLADIPE 420 SRVRLMRKRV VKMIPGLVYS AAGVEGIGGG MKDAVDVMVD GMLRRVAEQR PRWRTT* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-52 | 70 | 402 | 344 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN35419.1 | 0 | 1 | 476 | 1 | 476 | unknown [Zea mays] |
| EMBL | CAD41668.3 | 0 | 3 | 476 | 1 | 471 | OSJNBa0019K04.15 [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY95237.1 | 0 | 3 | 476 | 1 | 471 | hypothetical protein OsI_17054 [Oryza sativa Indica Group] |
| RefSeq | NP_001053616.1 | 0 | 2 | 476 | 3 | 474 | Os04g0574100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002446968.1 | 0 | 1 | 476 | 1 | 479 | hypothetical protein SORBIDRAFT_06g026020 [Sorghum bicolor] |
