| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G306693_T01 |
| Family | GH28 |
| Protein Properties | Length: 199 Molecular Weight: 21281.5 Isoelectric Point: 8.376 |
| Chromosome | Chromosome/Scaffold: 6 Start: 99629072 End: 99631337 |
| Description | polygalacturonase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH28 | 65 | 193 | 3.1e-23 |
| ASACGDTGKQTILIPKGDFLVGQLNFTGPCKGDVTIHVDGNLLSTMDLSQYKEHGNWIEILRVDNLVITGKGNLDGLGPAVWSKNSCAKKYDCKILPNSL VMDFVNNGEVSGVTLLNSKFFHMKALTSR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 199 Download |
| MACTDNVMRA LFLLALFCVM HGEKEESKRI DAKASGPGGS FDITKLGASG NGKIDNTKAV 60 QEAWASACGD TGKQTILIPK GDFLVGQLNF TGPCKGDVTI HVDGNLLSTM DLSQYKEHGN 120 WIEILRVDNL VITGKGNLDG LGPAVWSKNS CAKKYDCKIL PNSLVMDFVN NGEVSGVTLL 180 NSKFFHMKAL TSRGRVKA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02218 | PLN02218 | 2.0e-18 | 43 | 193 | 156 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 1.0e-18 | 41 | 196 | 161 | + Probable polygalacturonase | ||
| PLN02155 | PLN02155 | 2.0e-19 | 41 | 187 | 148 | + polygalacturonase | ||
| pfam00295 | Glyco_hydro_28 | 7.0e-33 | 68 | 188 | 121 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02188 | PLN02188 | 8.0e-40 | 6 | 194 | 191 | + polygalacturonase/glycoside hydrolase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004650 | polygalacturonase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA44247.1 | 0 | 1 | 187 | 1 | 187 | polygalacturonase [Zea mays] |
| EMBL | CAA44248.1 | 0 | 1 | 187 | 1 | 187 | polygalacturonase [Zea mays] |
| EMBL | CAA46680.1 | 0 | 1 | 187 | 1 | 187 | polygalacturonase [Zea mays] |
| RefSeq | NP_001105432.1 | 0 | 1 | 187 | 1 | 187 | exopolygalacturonase precursor [Zea mays] |
| Swiss-Prot | P35338 | 0 | 1 | 187 | 1 | 187 | PGLR2_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName: Full=Pectinase; AltName: Full=Galacturan 1,4-alpha-galacturonidase; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3jur_D | 0.004 | 37 | 140 | 24 | 135 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_C | 0.004 | 37 | 140 | 24 | 135 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_B | 0.004 | 37 | 140 | 24 | 135 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_A | 0.004 | 37 | 140 | 24 | 135 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
