| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G308707_T01 |
| Family | GH2 |
| Protein Properties | Length: 979 Molecular Weight: 110309 Isoelectric Point: 6.4846 |
| Chromosome | Chromosome/Scaffold: 6 Start: 143920912 End: 143955690 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 41 | 766 | 0 |
| PAAPWMSAAVPGTVLGTLLKNKLIPDPFYGLNNQAIIDIADAGREYYTFWFFTTFQCALSGNQHATLNFRGINYSAEMYLNGHKEVLPKGMFRRHNIDIT DILHPDGNNLLAVLVHPPDHPGKIPPQGGQGGDHEIGKDVATQYVEGWDWMCPIRDRNTGIWDEVSISISGPVNITDPHLVSTFHDDFKRSYLHCTLQLE NKSSWIADCTLKIQVSTELEGNICLVEHLQSYAITVPPQSDIEYTIPSLFFYKPNLWWPNGMGKQSLYNIEISVDVKGFGESDSWSHYFGFRKIESTIDD STGGRIFKVNGEPIFIRGGNWILSDGLLRLTKKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDVYGLMVWQEFWITGDVDGRGIPVSNPNGPLDH DLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDLKLHPMFVSYQTSKSEVIYLSEESTDPSKYLDGTRVYVQGSMWDGFANGKGDFTDGPY EIQYPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPPVGWSIPILKKRIDGYIEEVPNPIWDYHKYIPYSKPGKVHDQIELYGAPKDLDDFCEKAQLV NYVQYRALLEGWTSFMWTKFTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAQPIHVQLNLVTYFVEVVNTTADELKDMAVEISVWDLDGACPYY KVTEKIVIPPKKVKQIIEMKYPKMKD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 979 Download |
| MSVAVGKRVL DTGWLAARST EVALTGVQLT TTHPPAADPA PAAPWMSAAV PGTVLGTLLK 60 NKLIPDPFYG LNNQAIIDIA DAGREYYTFW FFTTFQCALS GNQHATLNFR GINYSAEMYL 120 NGHKEVLPKG MFRRHNIDIT DILHPDGNNL LAVLVHPPDH PGKIPPQGGQ GGDHEIGKDV 180 ATQYVEGWDW MCPIRDRNTG IWDEVSISIS GPVNITDPHL VSTFHDDFKR SYLHCTLQLE 240 NKSSWIADCT LKIQVSTELE GNICLVEHLQ SYAITVPPQS DIEYTIPSLF FYKPNLWWPN 300 GMGKQSLYNI EISVDVKGFG ESDSWSHYFG FRKIESTIDD STGGRIFKVN GEPIFIRGGN 360 WILSDGLLRL TKKRYMTDIK FHADMNFNML RCWGGGLAER PDFYHFCDVY GLMVWQEFWI 420 TGDVDGRGIP VSNPNGPLDH DLFLLCARDT VKLLRNHASL ALWVGGNEQV PPVDINKALK 480 NDLKLHPMFV SYQTSKSEVI YLSEESTDPS KYLDGTRVYV QGSMWDGFAN GKGDFTDGPY 540 EIQYPESFFK DSFYKYGFNP EVGSVGVPVA ATIRATMPPV GWSIPILKKR IDGYIEEVPN 600 PIWDYHKYIP YSKPGKVHDQ IELYGAPKDL DDFCEKAQLV NYVQYRALLE GWTSFMWTKF 660 TGVLIWKTQN PWTGLRGQFY DHLQDQTAGF YGCRCAAQPI HVQLNLVTYF VEVVNTTADE 720 LKDMAVEISV WDLDGACPYY KVTEKIVIPP KKVKQIIEMK YPKMKDAKPV YFLLLKLFRL 780 SDNGTISRNF YWLHLPGQDY KSLEQYQQKK IPLKIDSDVS VSGTRHKVRM TVENISKKSV 840 VDSTRSVSAM DLGDASGSHS TRKETTRKGN GSDGLWRKIR SGLGVARPSD NRRTLEVSGT 900 DSGVAFFLHF SVHTSESSTD GEEYNDTRIL PVHYSDNYFS LTPGENMAVD ISFEAPQGSS 960 PRVVLRGWNH HLDHAVMI* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 0.003 | 138 | 468 | 366 | + beta-D-galactosidase; Reviewed | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-5 | 88 | 156 | 70 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 5.0e-11 | 102 | 468 | 389 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-11 | 215 | 332 | 118 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 2.0e-33 | 63 | 674 | 634 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79162.1 | 0 | 5 | 978 | 16 | 985 | hypothetical protein OsI_19836 [Oryza sativa Indica Group] |
| RefSeq | NP_001055444.1 | 0 | 6 | 978 | 16 | 984 | Os05g0391500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002319539.1 | 0 | 5 | 976 | 4 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002439742.1 | 0 | 1 | 978 | 1 | 978 | hypothetical protein SORBIDRAFT_09g019350 [Sorghum bicolor] |
| RefSeq | XP_002512381.1 | 0 | 5 | 977 | 4 | 973 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 41 | 793 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 41 | 793 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 41 | 793 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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