| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G310739_T01 |
| Family | CBM43 |
| Protein Properties | Length: 482 Molecular Weight: 52491.2 Isoelectric Point: 8.5111 |
| Chromosome | Chromosome/Scaffold: 6 Start: 161111553 End: 161116378 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 371 | 452 | 5.6e-23 |
| WCVFNKDTKDKYKDLPASVNYACSNADCTPLGYGSSCNGLSHDGNISYAFNIYFQTMDQDVRACSFGGLAKITTTNASQGGC | |||
| GH17 | 30 | 349 | 0 |
| VGVNWGTMMSHPIHPSAVVEMLRANGVDRVKLFDADPWTVSALAGSGVQAMLAAPNDQLASLARDPRRARDWVRQNVTANINAGVDVRYVAVGNEPFLKS YNGSFINITFPALKNMQRAIDEAGFGQHIKVVVPLNADIYSSPENKPVPSAGTFRKDINTLMVDIVNYLHANDAPFVVNIYPFLSLYQNPNFPLNFSFFD GATKPVYDQGMVYTNVFDANFDTLVWSLRKAGVPDMRIIVGEVGWPSDGDKNANTKYAQRFYNGFLKKMTKNVGTPLRPGRMEVYLFALIDENQKSVLPG RFERHWGLFTYDGKPKFSMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| MAPRPAAAVF VVAAVVVLLP PPAAAAAPPV GVNWGTMMSH PIHPSAVVEM LRANGVDRVK 60 LFDADPWTVS ALAGSGVQAM LAAPNDQLAS LARDPRRARD WVRQNVTANI NAGVDVRYVA 120 VGNEPFLKSY NGSFINITFP ALKNMQRAID EAGFGQHIKV VVPLNADIYS SPENKPVPSA 180 GTFRKDINTL MVDIVNYLHA NDAPFVVNIY PFLSLYQNPN FPLNFSFFDG ATKPVYDQGM 240 VYTNVFDANF DTLVWSLRKA GVPDMRIIVG EVGWPSDGDK NANTKYAQRF YNGFLKKMTK 300 NVGTPLRPGR MEVYLFALID ENQKSVLPGR FERHWGLFTY DGKPKFSMDL SGNGKGSVAE 360 VKGVQYLPPQ WCVFNKDTKD KYKDLPASVN YACSNADCTP LGYGSSCNGL SHDGNISYAF 420 NIYFQTMDQD VRACSFGGLA KITTTNASQG GCLFPVQITS ASVTVVPLIF LPMLVSVITL 480 L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-15 | 370 | 440 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-29 | 370 | 454 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-74 | 31 | 349 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79587.1 | 0 | 30 | 430 | 33 | 432 | hypothetical protein OsI_20766 [Oryza sativa Indica Group] |
| GenBank | EEE64491.1 | 0 | 30 | 479 | 33 | 488 | hypothetical protein OsJ_19341 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056153.1 | 0 | 30 | 479 | 33 | 488 | Os05g0535100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152213.1 | 0 | 33 | 460 | 33 | 460 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002440138.1 | 0 | 33 | 462 | 34 | 463 | hypothetical protein SORBIDRAFT_09g026690 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 29 | 353 | 2 | 317 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |
| PDB | 3ur8_A | 0 | 29 | 353 | 2 | 317 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |
| PDB | 3ur7_B | 0 | 29 | 353 | 2 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 29 | 353 | 2 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 29 | 353 | 2 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
