| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G318299_T01 |
| Family | CE8 |
| Protein Properties | Length: 310 Molecular Weight: 32794.6 Isoelectric Point: 5.9974 |
| Chromosome | Chromosome/Scaffold: 7 Start: 54328287 End: 54330312 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 11 | 274 | 0 |
| LTVDRTGCANFTSLQKAVDAVPDYAAARTLIAVDAGVYAEKVVGRGNLNTTIVWNDTANSTGGTFYSATVAVLAANFVAYNAVALRVRGDQAAFYWCGFY SSQDTLLDEQGRHFFRGCYVEGSIDFIFGNARSLYLGCTISSVANAAANGTVTGSVTAHGRASLAERTGLAFVDCNVVGTGQVWLGRAWGPYATVVFART YLSAVVAPAGWNDWNDPARQQSVFFGEYDCTGPGASGGTAQRVAYARQLDQRQAAPFMDLSYIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 310 Download |
| MASLHNASLV LTVDRTGCAN FTSLQKAVDA VPDYAAARTL IAVDAGVYAE KVVGRGNLNT 60 TIVWNDTANS TGGTFYSATV AVLAANFVAY NAVALRVRGD QAAFYWCGFY SSQDTLLDEQ 120 GRHFFRGCYV EGSIDFIFGN ARSLYLGCTI SSVANAAANG TVTGSVTAHG RASLAERTGL 180 AFVDCNVVGT GQVWLGRAWG PYATVVFART YLSAVVAPAG WNDWNDPARQ QSVFFGEYDC 240 TGPGASGGTA QRVAYARQLD QRQAAPFMDL SYINGNQWAL PPILGAAGED IISAEFSRGQ 300 PGQHHVNLV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 5.0e-81 | 9 | 281 | 309 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 2.0e-89 | 8 | 278 | 294 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 4.0e-94 | 10 | 282 | 303 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 3.0e-103 | 8 | 281 | 310 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 5.0e-122 | 6 | 284 | 310 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC85099.1 | 0 | 1 | 282 | 177 | 493 | hypothetical protein OsI_32473 [Oryza sativa Indica Group] |
| RefSeq | NP_001063991.1 | 0 | 1 | 282 | 79 | 395 | Os09g0571100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002264941.1 | 0 | 4 | 281 | 8 | 311 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326223.1 | 0 | 5 | 283 | 13 | 322 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002459865.1 | 0 | 1 | 302 | 91 | 426 | hypothetical protein SORBIDRAFT_02g012560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 6e-36 | 13 | 278 | 7 | 303 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 9e-34 | 17 | 278 | 15 | 307 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 0.0000000005 | 92 | 267 | 130 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 0.0000000005 | 92 | 267 | 130 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 0.0000000005 | 92 | 267 | 130 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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