| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G325008_T01 |
| Family | CBM43 |
| Protein Properties | Length: 659 Molecular Weight: 69901.9 Isoelectric Point: 7.5611 |
| Chromosome | Chromosome/Scaffold: 7 Start: 152391333 End: 152401606 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 512 | 593 | 1.6e-32 |
| CVAADDADQKAVQAAMDWACGPGRADCTAIQPGQACYQPDDVRSHASFAFDAYYQSQGRAAGSCYFQGAGMVTTVDPSHDSC | |||
| GH17 | 162 | 493 | 0 |
| VGVTIGTQVTNLLSPSDLASFLRAQRITRVRLYDADPRLLSALAASGVRAIVGVPNDELLALGSSPATAASWVSRRVVPFAGVNSSTPNVVSAIAVGDEV PTALPSALPVLLPAIRSLAAALAAANLSSIPVSTPLPFSVVVDPFPPSQAFFNQSLDKSFVAPLLAHLANTSAPLMLNLYPYYSLMQSKGVIPLDNALFR PLPPSMEMVDPNTLLRYTNVFDAMLDAVRVAVRNLNATGGAGVPILVTETGWPSYGDRRAEPYAGRDNADAYNSNLIKHVLEEKAGTPMAPGAGAQSSAY IYELFNEDLRAGPVSEANWGLFYGNGTPVYLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 659 Download |
| MQNGDIINID VNVFQNGYHG GTFRTFACGQ VNDSIKHFLN DQLHPSSTKR QARTLPLPRQ 60 RHAAEISNLG GGREGDSWRK RSSAHQKKQS WTKEAVPEAG TSRSRRSRAH YQIPMGSRSG 120 GGSVSGSCLL LFPFLLLLHL ISLRSGPSAV LVSAAGSGEP YVGVTIGTQV TNLLSPSDLA 180 SFLRAQRITR VRLYDADPRL LSALAASGVR AIVGVPNDEL LALGSSPATA ASWVSRRVVP 240 FAGVNSSTPN VVSAIAVGDE VPTALPSALP VLLPAIRSLA AALAAANLSS IPVSTPLPFS 300 VVVDPFPPSQ AFFNQSLDKS FVAPLLAHLA NTSAPLMLNL YPYYSLMQSK GVIPLDNALF 360 RPLPPSMEMV DPNTLLRYTN VFDAMLDAVR VAVRNLNATG GAGVPILVTE TGWPSYGDRR 420 AEPYAGRDNA DAYNSNLIKH VLEEKAGTPM APGAGAQSSA YIYELFNEDL RAGPVSEANW 480 GLFYGNGTPV YLLHVSGADG FLGNDTTDRT FCVAADDADQ KAVQAAMDWA CGPGRADCTA 540 IQPGQACYQP DDVRSHASFA FDAYYQSQGR AAGSCYFQGA GMVTTVDPSH DSCLFPGSKL 600 LNNATGSGNT NTSSTPTSDA EGSAIWRLRT GRDKGLLLFL RLVLSIAVAI VVDSNFWT* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK05716 | PRK05716 | 5.0e-7 | 2 | 36 | 35 | + methionine aminopeptidase; Validated | ||
| cd01086 | MetAP1 | 3.0e-8 | 2 | 39 | 38 | + Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. | ||
| pfam07983 | X8 | 2.0e-16 | 527 | 582 | 61 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-34 | 510 | 595 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-61 | 162 | 491 | 330 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC83956.1 | 0 | 159 | 590 | 42 | 471 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
| GenBank | EEC82125.1 | 0 | 159 | 658 | 40 | 538 | hypothetical protein OsI_26155 [Oryza sativa Indica Group] |
| RefSeq | NP_001059752.1 | 0 | 159 | 658 | 42 | 540 | Os07g0510200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152289.1 | 0 | 115 | 658 | 1 | 544 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| RefSeq | XP_002518468.1 | 0 | 158 | 650 | 46 | 528 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 162 | 493 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 162 | 494 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 162 | 494 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 9.94922e-44 | 162 | 496 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 9.94922e-44 | 162 | 496 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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