| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G325008_T04 |
| Family | CBM43 |
| Protein Properties | Length: 599 Molecular Weight: 63591.9 Isoelectric Point: 7.2793 |
| Chromosome | Chromosome/Scaffold: 7 Start: 152391511 End: 152397214 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 502 | 581 | 9.6e-31 |
| CVAADDADQKAVQAAMDWACGPGRADCTAIQPGQACYQPDDVRSHASFAFDAYYQSQGRAAGSCYFQGAGMVTTVDPSEC | |||
| GH17 | 152 | 483 | 0 |
| VGVTIGTQVTNLLSPSDLASFLRAQRITRVRLYDADPRLLSALAASGVRAIVGVPNDELLALGSSPATAASWVSRRVVPFAGVNSSTPNVVSAIAVGDEV PTALPSALPVLLPAIRSLAAALAAANLSSIPVSTPLPFSVVVDPFPPSQAFFNQSLDKSFVAPLLAHLANTSAPLMLNLYPYYSLMQSKGVIPLDNALFR PLPPSMEMVDPNTLLRYTNVFDAMLDAVRVAVRNLNATGGAGVPILVTETGWPSYGDRRAEPYAGRDNADAYNSNLIKHVLEEKAGTPMAPGAGAQSSAY IYELFNEDLRAGPVSEANWGLFYGNGTPVYLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 599 Download |
| MQNGDIINID VNVFQNGYHG GTFRTFACGQ DQLHPSSTKR QARTLPLPRQ RHAAEISNLG 60 GGREGDSWRK RSSAHQKKQS WTKEAVPEAG TSRSRRSRAH YQIPMGSRSG GGSVSGSCLL 120 LFPFLLLLHL ISLRSGPSAV LVSAAGSGEP YVGVTIGTQV TNLLSPSDLA SFLRAQRITR 180 VRLYDADPRL LSALAASGVR AIVGVPNDEL LALGSSPATA ASWVSRRVVP FAGVNSSTPN 240 VVSAIAVGDE VPTALPSALP VLLPAIRSLA AALAAANLSS IPVSTPLPFS VVVDPFPPSQ 300 AFFNQSLDKS FVAPLLAHLA NTSAPLMLNL YPYYSLMQSK GVIPLDNALF RPLPPSMEMV 360 DPNTLLRYTN VFDAMLDAVR VAVRNLNATG GAGVPILVTE TGWPSYGDRR AEPYAGRDNA 420 DAYNSNLIKH VLEEKAGTPM APGAGAQSSA YIYELFNEDL RAGPVSEANW GLFYGNGTPV 480 YLLHVSGADG FLGNDTTDRT FCVAADDADQ KAVQAAMDWA CGPGRADCTA IQPGQACYQP 540 DDVRSHASFA FDAYYQSQGR AAGSCYFQGA GMVTTVDPSE CHLAFFSACS IVTIRVYY* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd01086 | MetAP1 | 3.0e-6 | 2 | 30 | 29 | + Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. | ||
| COG5309 | COG5309 | 1.0e-6 | 359 | 476 | 120 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-16 | 517 | 572 | 61 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-30 | 500 | 579 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-62 | 152 | 481 | 330 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17632.1 | 0 | 149 | 580 | 41 | 460 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
| DDBJ | BAC83956.1 | 0 | 149 | 583 | 42 | 480 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
| GenBank | EEC82125.1 | 0 | 149 | 585 | 40 | 474 | hypothetical protein OsI_26155 [Oryza sativa Indica Group] |
| RefSeq | NP_001059752.1 | 0 | 149 | 585 | 42 | 476 | Os07g0510200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152289.1 | 0 | 105 | 585 | 1 | 481 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 152 | 483 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 152 | 484 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 152 | 484 | 1 | 305 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 7.00649e-44 | 152 | 486 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 7.00649e-44 | 152 | 486 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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