| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G325561_T01 |
| Family | GT47 |
| Protein Properties | Length: 510 Molecular Weight: 57255.2 Isoelectric Point: 9.0008 |
| Chromosome | Chromosome/Scaffold: 9 Start: 14645426 End: 14647309 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 159 | 460 | 0 |
| KLFRVYVYEEGEPPILHAGPCKNIYTIEGRFIEQLELMAPSPASSSRRGTRRRSASDVRTSEPARAHAFFLPFSVSQMVQFAYRPNTYDKTPLRAIVADY VRVVASRHPYWNRSAGADHFMLACHDWGPEASTGHPELHANGIRALCNANSSEGFRPWQDVSVPDINLYDGDMPRQLLAPAPGVTSRPFLAFFAGGRHGH IRDLLLRHWKGRDPDFFPVYEHRHEDGFDYYSFMRRARFCLCPSGYQVASPRVVESIHAECVPVILSDGYVLPFADVLRWEAFSVAVPVADIPRLREVLE RI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 510 Download |
| MAPECSRRDA PPSATLLIVC VALYTVVLAV ASSPKALASS SALSSRARAA PEQQLLLSAD 60 LTTRKETVKS LAKRSYVCQE ESARRPGETR RPPSVEQELD VARAAIRRTA QRHGDAGRAG 120 DGNVSSANTW FDAGVEYALL ASVYRNPAAF HRSYAEMEKL FRVYVYEEGE PPILHAGPCK 180 NIYTIEGRFI EQLELMAPSP ASSSRRGTRR RSASDVRTSE PARAHAFFLP FSVSQMVQFA 240 YRPNTYDKTP LRAIVADYVR VVASRHPYWN RSAGADHFML ACHDWGPEAS TGHPELHANG 300 IRALCNANSS EGFRPWQDVS VPDINLYDGD MPRQLLAPAP GVTSRPFLAF FAGGRHGHIR 360 DLLLRHWKGR DPDFFPVYEH RHEDGFDYYS FMRRARFCLC PSGYQVASPR VVESIHAECV 420 PVILSDGYVL PFADVLRWEA FSVAVPVADI PRLREVLERI PAPEVEKLQQ GVRLVKRHFM 480 LNQPPQRLDM FNMILHSVWL RRLNLRLDH* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 8.0e-63 | 157 | 460 | 324 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD44815.1 | 0 | 93 | 508 | 64 | 512 | putative pectin-glucuronyltransferase [Oryza sativa Japonica Group] |
| EMBL | CAH67778.1 | 0 | 94 | 507 | 38 | 439 | H0201G08.5 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC80122.1 | 0 | 93 | 508 | 64 | 543 | hypothetical protein OsI_21883 [Oryza sativa Indica Group] |
| RefSeq | NP_001052025.1 | 0 | 119 | 507 | 60 | 439 | Os04g0109900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002437936.1 | 0 | 152 | 499 | 52 | 402 | hypothetical protein SORBIDRAFT_10g005120 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
