| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G347708_T01 |
| Family | GH14 |
| Protein Properties | Length: 299 Molecular Weight: 32105.5 Isoelectric Point: 6.3454 |
| Chromosome | Chromosome/Scaffold: 1 Start: 60022740 End: 60024539 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH14 | 54 | 267 | 0 |
| SAMTKYMLARLKRHAESSGQPLWGLSGPHDGPRYDDESPESSAFFRELGGSWKSAYGEFFLSWYTGELLAHGDRVLAAASSAFRGKPVELSAKVPLLRGP GTGPSPADATAGFHGGYGPVAEMFARHGCAVIAAGVEARPDATAEERLAQVKAACTEHGVHLAAESAPLAVARGSDGDGPARVVWLSAGRTRPCQFTYQR MGAEFFSPGHWPLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 299 Download |
| MLHAERXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX TRAPVASTAS ASSSAMTKYM 60 LARLKRHAES SGQPLWGLSG PHDGPRYDDE SPESSAFFRE LGGSWKSAYG EFFLSWYTGE 120 LLAHGDRVLA AASSAFRGKP VELSAKVPLL RGPGTGPSPA DATAGFHGGY GPVAEMFARH 180 GCAVIAAGVE ARPDATAEER LAQVKAACTE HGVHLAAESA PLAVARGSDG DGPARVVWLS 240 AGRTRPCQFT YQRMGAEFFS PGHWPLFVQF VRALECPEEA HEDDLPASAD GGERLTVPS 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01373 | Glyco_hydro_14 | 4.0e-17 | 57 | 270 | 232 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02161 | PLN02161 | 1.0e-22 | 58 | 274 | 236 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-24 | 58 | 280 | 254 | + beta-amylase | ||
| PLN00197 | PLN00197 | 3.0e-36 | 58 | 281 | 249 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-40 | 58 | 297 | 264 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95933.1 | 0 | 58 | 299 | 275 | 508 | Glycosyl hydrolase family 14 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001050116.1 | 0 | 58 | 299 | 447 | 680 | Os03g0351300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151271.1 | 0 | 58 | 299 | 279 | 520 | beta-amylase [Zea mays] |
| RefSeq | XP_002463351.1 | 0 | 58 | 297 | 273 | 522 | hypothetical protein SORBIDRAFT_02g042220 [Sorghum bicolor] |
| RefSeq | XP_002467860.1 | 0 | 58 | 299 | 276 | 510 | hypothetical protein SORBIDRAFT_01g035370 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 3e-20 | 58 | 220 | 205 | 376 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1wds_A | 5e-20 | 58 | 279 | 211 | 446 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1q6g_A | 7e-20 | 58 | 279 | 211 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1wdr_A | 1e-19 | 58 | 279 | 211 | 446 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6d_A | 1e-19 | 58 | 279 | 211 | 446 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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