| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G348551_T01 |
| Family | GT5 |
| Protein Properties | Length: 765 Molecular Weight: 83667.4 Isoelectric Point: 5.9143 |
| Chromosome | Chromosome/Scaffold: 6 Start: 113233723 End: 113238779 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 445 | 757 | 0 |
| VEGRGPVDEFPYMDLPEHYLQHFELYDPVGGEHANIFAAGLKMADRVVTVSRGYLWELKTVEGGWGLHDIIRSNDWKINGIVNGIDHQEWNPKVDVHLRS DGYTNYSLETLDAGKRQCKAALQRELGLEVRDDVPLLGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVMLGTGRADLERMLQHLEREHPNKVRGWVGFSVP MAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFSDAGLGWTFDRAEANKLIEALRHCLDTYRNYEESWKSLQARGMSQDL SWDHAAELYEDVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 765 Download |
| MLTFQLSDQT LHPFDHASFQ GTARLSAVRC PPRALRSRAA LPAARPRAHW TSFRPAPIDP 60 AAMSSAAVSS SSSTFFLALA SASPGGRRRA RVGSSPFHTG ASLSFAFWAP PSPPRAPRDA 120 ALVRAEAEAG GKDAPPERSG DAARLPRARR NAVSKRRDPL QPVGRYGSAT GNTARTGAAS 180 CQNAALADVE IKSIVAAPPT SIVKFPAPGY RMILPSGDIA PETVLPAPKP LHESPAVNSV 240 PPVSIPNPDT DGIAALAEKK YAQVDGDSNG IAPPTVEPLV QEATWDFKKY IGFDEPDEAK 300 DDSRVGADDA GSFEHYGDND SGPLAGENVM NVIVVAAECS PWCKTGKNIT LSGFFQNCFS 360 FEFDGVTDVV VPRYGDYVEA FDMGIRKYYK AAGQDLEVNY FHAFIDGVDF VFIDAPLFRH 420 RQDDIYGGSR QEIMKRMILF CKVAVEGRGP VDEFPYMDLP EHYLQHFELY DPVGGEHANI 480 FAAGLKMADR VVTVSRGYLW ELKTVEGGWG LHDIIRSNDW KINGIVNGID HQEWNPKVDV 540 HLRSDGYTNY SLETLDAGKR QCKAALQREL GLEVRDDVPL LGFIGRLDGQ KGVDIIGDAM 600 PWIAGQDVQL VMLGTGRADL ERMLQHLERE HPNKVRGWVG FSVPMAHRIT AGADVLVMPS 660 RFEPCGLNQL YAMAYGTVPV VHAVGGLRDT VAPFDPFSDA GLGWTFDRAE ANKLIEALRH 720 CLDTYRNYEE SWKSLQARGM SQDLSWDHAA ELYEDVLVKA KYQW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 2.0e-94 | 330 | 755 | 497 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 9.0e-112 | 447 | 757 | 317 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 7.0e-142 | 331 | 757 | 500 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 1.0e-150 | 330 | 760 | 487 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD53263.1 | 0 | 96 | 764 | 32 | 799 | AF155217_1 starch synthase IIA [Triticum aestivum] |
| GenBank | AAN28307.1 | 0 | 63 | 764 | 1 | 802 | starch synthase II [Hordeum vulgare subsp. vulgare] |
| GenBank | AAN28309.1 | 0 | 63 | 764 | 1 | 802 | starch synthase II [Hordeum vulgare subsp. vulgare] |
| EMBL | CAB96626.1 | 0 | 96 | 764 | 32 | 799 | starch synthase IIa-2 [Triticum aestivum] |
| EMBL | CAB96627.1 | 0 | 87 | 764 | 23 | 798 | starch synthase IIa-3 [Triticum aestivum] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 438 | 758 | 186 | 509 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3vuf_A | 0.0000004 | 330 | 446 | 10 | 134 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3vue_A | 0 | 438 | 758 | 186 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3vue_A | 0.0000004 | 330 | 446 | 10 | 134 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 479 | 761 | 196 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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