| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G357804_T01 |
| Family | GT41 |
| Protein Properties | Length: 786 Molecular Weight: 87298.2 Isoelectric Point: 6.1499 |
| Chromosome | Chromosome/Scaffold: 1 Start: 204642529 End: 204648554 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 348 | 784 | 0 |
| SIKPLFAQSLNNLGVVYTVQGKMDSAASMIEKAIHANPTYAEAYNNLGVLYRDAGSITLAIHAYERCLQIDPDSRNAGQNRLLAMNYIDEGSDDKLYEAH REWGKRFMKLYPQYTSWDNSKVADRPLIIGYLSPDYFTHSVSYFIEAPLTHHDSTVCKVVVYSGVVKADAKTLRFKDKVLKKGGLWRDIYGIDEKRVASL VREDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNTTGLPTIDYRISDSLTDPPMTKQKHVEELVRLPESFLCYTPSPEAGPVCPTPAISNGFVT FGSFNNLAKITPKVLQVWARILCSVPNSRLVVKCKPFCCENIRQKFLATLEELGLESLRVDLLPLIHLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYM GVPCVTMAGAVHAHNVGVSLLSKVGLGRLVAKTEDEY | |||
| Full Sequence |
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| Protein Sequence Length: 786 Download |
| MGQPGMDSVP GKENNGIAPN LNGVVSPAKQ QLEGKEAMRY ANILRSRNKF ADAINLYTIV 60 LEKDGTNVEA LIGKGICLQA QNLPRQAIEC FTEAVKIEPG NASALTHCGM IYKDEGHLVE 120 AAEAYQKARM ADPSYKPASE FLAIVLTDLG TSLKLAGNTE EGIQKYCEAL EVDNHYAPAY 180 YNLGVVYSEM MQFDMALSCY EKAALERPLY AEAYCNMGVI YKNRGDLDAA IICYERCLTI 240 SPNFEIAKNN MAIALTDLGT KVKIEGDINR GVAYYKKALY YNWHYADAMY NLGVAYGEML 300 NFEMAIVFYE LALHFNPRCA EACNNLGVIY KDRDNLDKAV ECYQMALSIK PLFAQSLNNL 360 GVVYTVQGKM DSAASMIEKA IHANPTYAEA YNNLGVLYRD AGSITLAIHA YERCLQIDPD 420 SRNAGQNRLL AMNYIDEGSD DKLYEAHREW GKRFMKLYPQ YTSWDNSKVA DRPLIIGYLS 480 PDYFTHSVSY FIEAPLTHHD STVCKVVVYS GVVKADAKTL RFKDKVLKKG GLWRDIYGID 540 EKRVASLVRE DKVDILVELT GHTANNKLGT MACRPAPIQV TWIGYPNTTG LPTIDYRISD 600 SLTDPPMTKQ KHVEELVRLP ESFLCYTPSP EAGPVCPTPA ISNGFVTFGS FNNLAKITPK 660 VLQVWARILC SVPNSRLVVK CKPFCCENIR QKFLATLEEL GLESLRVDLL PLIHLNHDHM 720 QAYSLMDISL DTFPYAGTTT TCESLYMGVP CVTMAGAVHA HNVGVSLLSK VGLGRLVAKT 780 EDEYGA |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02917 | PEP_TPR_lipo | 9.0e-18 | 74 | 420 | 358 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 3.0e-18 | 41 | 460 | 421 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 1.0e-21 | 80 | 433 | 357 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| COG3914 | Spy | 2.0e-76 | 305 | 784 | 497 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC84033.1 | 0 | 6 | 784 | 1 | 804 | hypothetical protein OsI_30264 [Oryza sativa Indica Group] |
| GenBank | EEE69149.1 | 0 | 6 | 784 | 1 | 804 | hypothetical protein OsJ_28275 [Oryza sativa Japonica Group] |
| RefSeq | NP_001062501.1 | 0 | 1 | 784 | 1 | 784 | Os08g0559300 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | O82422 | 0 | 6 | 784 | 1 | 784 | SPY_HORVU RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=HvSPY |
| RefSeq | XP_002445679.1 | 0 | 1 | 784 | 1 | 784 | hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w3b_B | 2e-38 | 62 | 395 | 29 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 2e-26 | 103 | 427 | 17 | 344 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 4e-21 | 75 | 332 | 142 | 385 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 0.0000000002 | 53 | 258 | 188 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 0.000000002 | 42 | 226 | 211 | 388 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| Hydropathy |
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