| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G380286_T01 |
| Family | AA3 |
| Protein Properties | Length: 763 Molecular Weight: 82146 Isoelectric Point: 8.4559 |
| Chromosome | Chromosome/Scaffold: 1 Start: 232509754 End: 232515451 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 250 | 757 | 4.2039e-45 |
| HHTVQCDVVIVGSGCGGGVAAAVLAAAGRKVVVVEKGDYFTAESYTSVEGPSMERLYEKGGIFCTSNVTTIMFAGTTVGGGSAINWSASVRTPEWVTQEW AREHGLPMFGRPEYAHAMDAVCARLAVTGGCREEGFQNKVLRRGCEALGLRGDAVPRNSSEGHFCGSCHLGCPTGDKRGTDTTWLVDAVARGAVVLTGCK AERFVLESNPGGRDGRSNRCVGLVATCMSDGITKKLRIEAKVSVSACGALMTPPLLRNSGLQNSHVGRNLHLHPVSMAWGYFPDSTPEAELSGKCYEGGI ITTMRRVTARTIIQTPALGPGCWASLVPWESGRDMKERMLRYARTAHAFALVRDRGAGHVDGEGRVRYTPSREDVDELRNGLRQTLRILVAAGAAEVGTH RSDGLRLRCDGLRDEDLEAFLKQVTVEKGPMVPGHDKWALHCSAHQMGSCRMGSSPKHGAVDGRGESWEAEGLYVCDGSLLPTAVGVNPMITIQSTAYCV SKGIAESL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 763 Download |
| MATGRRGSPL LRRCKREGYT HGLRPPQMEA LRAMCGALIP SLPVEGLHVQ PQPGRGKDDL 60 DRFFRASAAD GAIPDEVAEM VTRCVWEGVL LMRIVLWVLS TRIGTLALCG RLCFSAGKSS 120 FPYACRFADM PVERRERVLQ RWSGARWLFP LKITFVIAKL LSHYAFYTMV NENSDNPSWK 180 AIGYSVPVPA AAADVDRLRP RELGPAEAEA PSPRPLDSGV VETRSLNDAT LLKSLTERGV 240 AVKAGVSGAH HTVQCDVVIV GSGCGGGVAA AVLAAAGRKV VVVEKGDYFT AESYTSVEGP 300 SMERLYEKGG IFCTSNVTTI MFAGTTVGGG SAINWSASVR TPEWVTQEWA REHGLPMFGR 360 PEYAHAMDAV CARLAVTGGC REEGFQNKVL RRGCEALGLR GDAVPRNSSE GHFCGSCHLG 420 CPTGDKRGTD TTWLVDAVAR GAVVLTGCKA ERFVLESNPG GRDGRSNRCV GLVATCMSDG 480 ITKKLRIEAK VSVSACGALM TPPLLRNSGL QNSHVGRNLH LHPVSMAWGY FPDSTPEAEL 540 SGKCYEGGII TTMRRVTART IIQTPALGPG CWASLVPWES GRDMKERMLR YARTAHAFAL 600 VRDRGAGHVD GEGRVRYTPS REDVDELRNG LRQTLRILVA AGAAEVGTHR SDGLRLRCDG 660 LRDEDLEAFL KQVTVEKGPM VPGHDKWALH CSAHQMGSCR MGSSPKHGAV DGRGESWEAE 720 GLYVCDGSLL PTAVGVNPMI TIQSTAYCVS KGIAESLARD NK* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 0.004 | 663 | 737 | 75 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 0.001 | 664 | 742 | 83 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 2.0e-20 | 614 | 747 | 134 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 3.0e-25 | 324 | 742 | 473 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-85 | 302 | 524 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36691.1 | 0 | 6 | 759 | 34 | 777 | unknown [Zea mays] |
| DDBJ | BAH94933.1 | 0 | 6 | 758 | 10 | 759 | Os10g0474966 [Oryza sativa Japonica Group] |
| RefSeq | NP_001142399.1 | 0 | 80 | 759 | 1 | 669 | hypothetical protein LOC100274574 [Zea mays] |
| RefSeq | XP_002464495.1 | 0 | 7 | 758 | 17 | 767 | hypothetical protein SORBIDRAFT_01g019470 [Sorghum bicolor] |
| RefSeq | XP_002464496.1 | 0 | 28 | 762 | 1 | 731 | hypothetical protein SORBIDRAFT_01g019480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.0005 | 443 | 742 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.0005 | 443 | 742 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3cox_A | 0.0008 | 684 | 746 | 437 | 494 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 1coy_A | 0.0008 | 684 | 746 | 437 | 494 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 2jbv_B | 0.001 | 443 | 742 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| Hydropathy |
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