| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G382557_T01 |
| Family | CE8 |
| Protein Properties | Length: 408 Molecular Weight: 43968.3 Isoelectric Point: 8.7713 |
| Chromosome | Chromosome/Scaffold: 1 Start: 148513254 End: 148515654 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 98 | 393 | 0 |
| YVVSPDGKGKFRTINEAVRAVPEGNKRRVILDIRTATYREKVLVPYTKPFITFLGNPKNPPVIMWDDRAATHGKDGKPVGTVGSATVAVESDYFMASGIV FRNHAPMAAPGQEGGQAVALRVFGTKAAFYDCTIEGGQDTLYDHKGLHYFKSCHIQGSVDFIFGFGRSLYEDCAIMSVTKQVAVVTAQQRTKSIAGAIES GFSFLRCRIAGTGAGQIYLGRAWGDSSRVVYSYTTMGKEVVPVGWDGWRIERPEKSGIYYGEYMCSGPGALPHKRIGWSLVLNDAQAKPFTGIHFI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 408 Download |
| MGHQNCRRPP HVVVALVAIV LLQPCFVSVA SSSSSVAIDG GGTNVKVPAV DGGAGSFVEF 60 VTENVELYSN VSNEHMYGSA GKVWDPQLLV AQGMVVRYVV SPDGKGKFRT INEAVRAVPE 120 GNKRRVILDI RTATYREKVL VPYTKPFITF LGNPKNPPVI MWDDRAATHG KDGKPVGTVG 180 SATVAVESDY FMASGIVFRN HAPMAAPGQE GGQAVALRVF GTKAAFYDCT IEGGQDTLYD 240 HKGLHYFKSC HIQGSVDFIF GFGRSLYEDC AIMSVTKQVA VVTAQQRTKS IAGAIESGFS 300 FLRCRIAGTG AGQIYLGRAW GDSSRVVYSY TTMGKEVVPV GWDGWRIERP EKSGIYYGEY 360 MCSGPGALPH KRIGWSLVLN DAQAKPFTGI HFIFGDSWIL PPPSLVG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 9.0e-82 | 100 | 401 | 312 | + probable pectinesterase | ||
| PLN02634 | PLN02634 | 3.0e-85 | 99 | 401 | 303 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 2.0e-90 | 99 | 399 | 304 | + pectinesterase | ||
| PLN02682 | PLN02682 | 5.0e-106 | 104 | 401 | 298 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 8.0e-113 | 85 | 405 | 322 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA95297.2 | 0 | 44 | 402 | 62 | 426 | Pectinesterase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACF22736.1 | 0 | 57 | 404 | 31 | 381 | pectinesterase family protein [Brachypodium distachyon] |
| GenBank | EEC69509.1 | 0 | 56 | 403 | 69 | 412 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
| RefSeq | NP_001067039.1 | 0 | 56 | 403 | 68 | 411 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002443368.1 | 0 | 1 | 405 | 1 | 431 | hypothetical protein SORBIDRAFT_08g018360 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 99 | 399 | 10 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 9e-39 | 94 | 399 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-19 | 101 | 274 | 12 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-19 | 101 | 274 | 12 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-19 | 101 | 274 | 12 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
