| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G402368_T01 |
| Family | GH27 |
| Protein Properties | Length: 670 Molecular Weight: 74233.6 Isoelectric Point: 9.8647 |
| Chromosome | Chromosome/Scaffold: 3 Start: 140682835 End: 140687208 |
| Description | Melibiase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH27 | 374 | 485 | 2.2e-21 |
| SMTYIADKNNKWASYAGPGGWDDPDMLEVGNGGMTLAEYLSHFSIWALMKAPLLIGCDVRNMTSETMEILSNKEVIQNPLGVQGRKILGQGKYGCREVWA GPLSGNRLVVAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 670 Download |
| MSSIDEWCDA NWQVMAARSP NVRLQKAIDR KNQSSMLKCP HSAPPKRPRA RFARLSAETE 60 AAEKAPVEPK PRVERICAMR ASPIRTKTAR VECPSERKKA LTTPRSKAVR SRQELFHNVK 120 HQKESLAAAA RKGTVVKSLF MSTTRKKEPV QTLAADKSKG AVSEVCSKLR KLNLACREVP 180 SRYISQPQPK NTKTAKKSEE TTVAKSEKRG LESKTNAKKK ILGRSVKRAN AGPNGENRNG 240 CSTAADESSL AETAGSHQER KVVLRELRIE VDASRRGNSD DNKENVSSAL SEEALDNSSH 300 YGSENRLLEN NENVPLKENV ALKKKVHQEQ AGKLKKTTNP RVLWDGGQYD PALWAGKVGN 360 SWHTTDDITV TWKSMTYIAD KNNKWASYAG PGGWDDPDML EVGNGGMTLA EYLSHFSIWA 420 LMKAPLLIGC DVRNMTSETM EILSNKEVIQ NPLGVQGRKI LGQGKYGCRE VWAGPLSGNR 480 LVVALWNRCS DTANVTMKLP AVGLDGYAAY SVRDLWKHET LSENVVGTFG AQVDVHDTKM 540 YIFLCNHVAS EYYDPNRSML ELVFAPVDEW IGRSDTEIID ATIEELAKLF PNEIAADQSK 600 AKILKYHIVK TPRSVYKTVP NCEPCRPLQR SPIEGFYLAG DYTKQKYLAS MEGAVLSGKA 660 LRPVHSAGL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02731 | phytoene_desat | 1.0e-61 | 551 | 659 | 109 | + phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. | ||
| PLN02692 | PLN02692 | 2.0e-70 | 343 | 543 | 204 | + alpha-galactosidase | ||
| PLN02612 | PLN02612 | 8.0e-73 | 551 | 659 | 109 | + phytoene desaturase | ||
| PLN02808 | PLN02808 | 2.0e-83 | 343 | 543 | 204 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 2.0e-134 | 343 | 543 | 204 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN33641.1 | 0 | 12 | 341 | 72 | 405 | unknown [Zea mays] |
| GenBank | ACR38530.1 | 0 | 13 | 341 | 73 | 403 | unknown [Zea mays] |
| RefSeq | NP_001130661.1 | 0 | 347 | 543 | 217 | 416 | hypothetical protein LOC100191764 [Zea mays] |
| RefSeq | NP_001130816.1 | 0 | 13 | 341 | 73 | 403 | hypothetical protein LOC100191920 [Zea mays] |
| RefSeq | XP_002463821.1 | 0 | 12 | 341 | 72 | 404 | hypothetical protein SORBIDRAFT_01g006810 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 347 | 546 | 165 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 1ktc_A | 2e-24 | 356 | 545 | 190 | 385 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 1ktb_A | 2e-24 | 356 | 545 | 190 | 385 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 1t0o_A | 3e-21 | 347 | 542 | 206 | 409 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 1szn_A | 3e-21 | 347 | 542 | 206 | 409 | A Chain A, The Structure Of Alpha-Galactosidase |
| Hydropathy |
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