| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G417455_T01 |
| Family | GH35 |
| Protein Properties | Length: 846 Molecular Weight: 92768.9 Isoelectric Point: 6.8298 |
| Chromosome | Chromosome/Scaffold: 1 Start: 13683411 End: 13689639 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 37 | 339 | 0 |
| LIDGQRRILFSGSIHYPRSTPDMWEGLIQKAKDGGLDVIQTYVFWNGHEPTPGNYYFEERYDLVRFVKTVQKAGLFVHLRIGPYICGEWNFGGFPVWLKY VPGISFRTDNEPFKTAMQGFTEKIVGMMKSENLFASQGGPIILSQIENEYGPEGKEFGAAGQAYINWAAKMAVGLDTGVPWVMCKEEDAPDPVINACNGF YCDAFSPNKPYKPTMWTEAWSGWFTEFGGTIRQRPVEDLAFAVARFVQKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLIREPKHSHLKE LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 846 Download |
| MGRWWPAALL GCAVAVVAVL AAAVVECAVT YDKKAVLIDG QRRILFSGSI HYPRSTPDMW 60 EGLIQKAKDG GLDVIQTYVF WNGHEPTPGN YYFEERYDLV RFVKTVQKAG LFVHLRIGPY 120 ICGEWNFGGF PVWLKYVPGI SFRTDNEPFK TAMQGFTEKI VGMMKSENLF ASQGGPIILS 180 QIENEYGPEG KEFGAAGQAY INWAAKMAVG LDTGVPWVMC KEEDAPDPVI NACNGFYCDA 240 FSPNKPYKPT MWTEAWSGWF TEFGGTIRQR PVEDLAFAVA RFVQKGGSFI NYYMYHGGTN 300 FGRTAGGPFI TTSYDYDAPI DEYGLIREPK HSHLKELHRA VKLCEQALVS VDPTITTLGT 360 MQEAHVFRSP SGCAAFLANY NSNSHAKVVF NNEQYSLPPW SISILPDCKN VVFNSATVGV 420 QTSQMQMWGD GATSMMWERY DEEVDSLAAA PLLTTTGLLE QLNVTRDSSD YLWYITSVDI 480 SPSENFLQGG GKPPSLSVQS AGHALHVFVN GQLQGSSYGT REDRRIKYNG NVNLRAGTNK 540 IALLSVACGL PNVGVHYETW NTGVGGPVVL HGLNEGSRDL TWQTWSYQVG LKGEQMNLNS 600 VEGSGSVEWM QGSLIAQKQQ PLAWYKAYFE TPSGDEPLAL DMGSMGKGQV WINGQSIGRY 660 WTAYADGDCK GCSYTGTFRA PKCQAGCGQP TQRWYHVPRS WLQPSRNLLV VLEELGGGDS 720 SKIALAKRSV SSVCADVSED HPNIKKWQIE SYGEREHRRA KVHLRCAHGQ SISAIRFASF 780 GTPVGTCGNF QQGGCHSASS HAVLEKRCIG LQRCVVAISP DNFGGDPCPS VTKRVAVEAV 840 CSPAA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-18 | 31 | 330 | 349 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-21 | 764 | 841 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-163 | 37 | 341 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 30 | 842 | 814 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM22973.1 | 0 | 26 | 845 | 24 | 843 | AF499737_1 beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACN29095.1 | 0 | 59 | 845 | 29 | 815 | unknown [Zea mays] |
| GenBank | EEE58382.1 | 0 | 26 | 845 | 24 | 851 | hypothetical protein OsJ_09539 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049068.1 | 0 | 26 | 845 | 24 | 841 | Os03g0165400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465807.1 | 0 | 26 | 845 | 24 | 842 | hypothetical protein SORBIDRAFT_01g046160 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.96182e-44 | 33 | 337 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-40 | 29 | 372 | 11 | 373 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-40 | 29 | 372 | 11 | 373 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
