| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G429873_T01 |
| Family | CBM43 |
| Protein Properties | Length: 345 Molecular Weight: 37237.4 Isoelectric Point: 10.34 |
| Chromosome | Chromosome/Scaffold: 3 Start: 216481488 End: 216483201 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 49 | 127 | 1.7e-34 |
| WCVASQSASPTALQVALDYACGYGADCSAIQQGGSCFNPDTVHDHASYAFNSYYQKNPAPTSCDFGGTATITNTDPSKQ | |||
| Full Sequence |
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| Protein Sequence Length: 345 Download |
| MSAYGADPAS KPSYSTFPSL ATGNGGAGAG AGAGGGGAAA GSGGGGGTWC VASQSASPTA 60 LQVALDYACG YGADCSAIQQ GGSCFNPDTV HDHASYAFNS YYQKNPAPTS CDFGGTATIT 120 NTDPSKQAHR HDRISWRSIL SVDNLLLQIF VYLTLSRISF RLAGSGSCQY PSSRYALVLR 180 PRESNSSKQR TKTKPDCYSK RWLKICYLVE WQRRRRRSEH GAPAIPDDDH AADSPQYRPD 240 DPDADGAGHR YPGLRAVPAR LQRLNFPSRL RIDVSPGLQR RQRRRREGEA AGRRGAGADA 300 SVRRRRDSVA ARLQMRARGA RWRLYRAVSG ETYVTWRAPY VVAG* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-26 | 48 | 118 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-41 | 48 | 125 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG38222.1 | 0 | 1 | 126 | 57 | 181 | GPI-anchored protein [Zea mays] |
| GenBank | ACN34160.1 | 0 | 1 | 344 | 1 | 344 | unknown [Zea mays] |
| RefSeq | NP_001131448.1 | 0 | 1 | 126 | 61 | 186 | hypothetical protein LOC100192780 [Zea mays] |
| RefSeq | NP_001142053.1 | 0 | 1 | 126 | 57 | 193 | hypothetical protein LOC100274209 [Zea mays] |
| RefSeq | XP_002456008.1 | 7.00649e-44 | 50 | 126 | 128 | 204 | hypothetical protein SORBIDRAFT_03g028790 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-16 | 47 | 125 | 11 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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