| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G430680_T02 |
| Family | GT48 |
| Protein Properties | Length: 1961 Molecular Weight: 225938 Isoelectric Point: 9.3073 |
| Chromosome | Chromosome/Scaffold: 6 Start: 82170167 End: 82186540 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 1066 | 1816 | 0 |
| VPTNLDARRRISFFANSLFMDMPNAPKVRNMLAFSILTPYYKEDVLFSLQNLEEPNEDGVSILFYLQKIYPDEWKNFLERVGCKNEEGLREDEELEEKLR LWASYRGQTLTRTVRGMMYYRKALELQAFLDMAEDDDLMEGYRATEVMPEDSQLMTQCKAIADMKFTYVVSCQQYGIQKRSNEPCAHDILRLMTEYPSLR VAYIDEVEAPSQDRNKKIEKVYYSVLVKASVTKPDEPGQSLDQVIYKIKLPGNAILGEGKPENQNHAIIFTRGECLQTIDMNQEHYMEEALKMRNLLQEF EKKHGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHITRGGVSKASKIINLSEDIFAGFNSTLREGNVTH HEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGRRFVHNAP LQVALASESFVQLGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFADNYRLYSRSHFVK GIELMILLVVYEIFSQPYRGAVTYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAPEKSWESWWEKEQEPLRYSGKRGTV VEILLALRFFIYQYGLVYHLNITKKITKDNQSVLVYCFSWVVIFVILLVMK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1961 Download |
| MAAPGRRTAD VSSSSPAPSP SPSTGRRLLR TQTVGNLGES IFDSEVVPSS LVEIAPILRV 60 ANEVEATNPR VAYLCRFYAF EKAHRLDPTS SGRGVRQFKT ALLQRLEREN DPTLKGRVHQ 120 SDAREMQRFY REYYKKYIQA LQHAADKADR ALLTKAYQTA AVLFEVLRAV NVSQSVEVDQ 180 AILDTHNKVE EKKKLYVPYN ILPLDPESTG QAIMRYPEIQ AAVYALRNTR GLPWPKDQDK 240 KPGEKNTGKD LLDWLQAMFG FQKDNVSNQR EHLVLLLANV HIMKVPKVDQ QPKLDDKALD 300 AVMKKLFKNY KKWCKYLGRK SSLWLPTIQQ EVQQRKLLYM GLYLLIWGEA ANLRFMPECI 360 CYIYHHMAFE LYGMLAGNVS PMTGENVKPA YGGDEEAFLI KVVTPIYKVI EKEAERSKTM 420 KSKHSHWRNY DDLNEYFWSV DCFRLGWPMR ADADFFKTPK DAYLNLLNGE NRSAGNTHWM 480 GKVNFVEIRS FWHIFRSFDR MWIFLILSLQ AMIIIAWNGG TPSDIFDAGV FKKVLSIFIT 540 AAILKLGQAI LDLIFGWKAR RNMSFAVKLR YILKLICAAA WVVILPVTYA YTWENPTGLA 600 RTIKSWLGDG QNQPSLYILA IVIYMAPNIV ASMLFLFPFM RRFLESSNVK VITIIMWWSQ 660 PRLFVGRGMH EGAFSLFKYT MFWVLLLATK LTVSFYIEIK PLVQPTIDIM REPIRTFQWH 720 EFFPHGTNNI GVVISLWAPI ILVYFMDTQI WYALFSTLIG GIYGAYRRLG EIRTLGMLRS 780 RFESLPEAFN ERLIPSDANK SKGLRAAFSS RPKASGDERQ KEKRAARFAQ MWNVIITSFR 840 EEDLIDNREM DLLLVPYCKD RELDIFQWPP FLLASKIPIA LDMAADSGGK DRDLTKRIKS 900 DPYFSFAIRE CYASFKNIIN TLVFGQREKD VLAQIFAVVD QHIEDETLIK DLNMRNLPAL 960 SKKFVELLEL LQKNKEEDLG QVVILFQDML EVVTRDIMEE QDQLGTLLES AHGANSRKHE 1020 GITPLDQQDQ LFAKAIKFPV DESIAWTEKI KRLHLLLTVK ESAMDVPTNL DARRRISFFA 1080 NSLFMDMPNA PKVRNMLAFS ILTPYYKEDV LFSLQNLEEP NEDGVSILFY LQKIYPDEWK 1140 NFLERVGCKN EEGLREDEEL EEKLRLWASY RGQTLTRTVR GMMYYRKALE LQAFLDMAED 1200 DDLMEGYRAT EVMPEDSQLM TQCKAIADMK FTYVVSCQQY GIQKRSNEPC AHDILRLMTE 1260 YPSLRVAYID EVEAPSQDRN KKIEKVYYSV LVKASVTKPD EPGQSLDQVI YKIKLPGNAI 1320 LGEGKPENQN HAIIFTRGEC LQTIDMNQEH YMEEALKMRN LLQEFEKKHG VRYPSILGVR 1380 EHIFTGSVSS LAWFMSNQET SFVTIGQRVL ANPLRVRFHY GHPDIFDRLF HITRGGVSKA 1440 SKIINLSEDI FAGFNSTLRE GNVTHHEYMQ VGKGRDVGLN QISLFEAKIA NGNGEQTLSR 1500 DIYRLGHRFD FFRMLSCYYT TIGFYFSTMI TVWTVYVFLY GRLYLVLSGL DEALATGRRF 1560 VHNAPLQVAL ASESFVQLGF LMALPMMMEI GLERGFRTAL SDFILMQLQL ASVFFTFSLG 1620 TKTHYYGRTL LHGGAEYRAT GRGFVVFHAK FADNYRLYSR SHFVKGIELM ILLVVYEIFS 1680 QPYRGAVTYI FITVSMWFMV GTWLFAPFLF NPSGFEWQKI VDDWTDWHKW ISNRGGIGVA 1740 PEKSWESWWE KEQEPLRYSG KRGTVVEILL ALRFFIYQYG LVYHLNITKK ITKDNQSVLV 1800 YCFSWVVIFV ILLVMKTVSV GRRRFSAEFQ LVFRLIKGLI FITFTAIVVI LIAIPGMTVL 1860 DIFVCILAFM PTGWGLLLIA QAIRPVIHKT GLWGSIKALA RGYEILMGLL LFTPIAFLAW 1920 FPFVSEFQTR MLFNQAFSRG LQISRILGGH KKDRGTRNKE * 1980 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03772 | Competence | 0.006 | 490 | 588 | 100 | + Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site. | ||
| pfam04652 | DUF605 | 7.0e-9 | 54 | 168 | 123 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 6.0e-56 | 334 | 450 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1066 | 1812 | 821 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD23015.1 | 0 | 26 | 1960 | 35 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
| DDBJ | BAD62105.1 | 0 | 1 | 1960 | 1 | 1959 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
| GenBank | EEE66395.1 | 0 | 1 | 1960 | 1 | 1982 | hypothetical protein OsJ_22734 [Oryza sativa Japonica Group] |
| RefSeq | XP_002439067.1 | 0 | 1 | 1960 | 1 | 1965 | hypothetical protein SORBIDRAFT_10g030970 [Sorghum bicolor] |
| RefSeq | XP_002453103.1 | 0 | 19 | 1960 | 20 | 1942 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lxm_A | 0.008 | 58 | 167 | 21 | 128 | B Chain B, Lip5-chmp5 |
| Transmembrane Domains | |
|---|---|
| Start | End |
| 501 | 520 |
| 535 | 557 |
| 569 | 591 |
| 616 | 638 |
| 675 | 697 |
| 723 | 745 |
| 750 | 767 |
| 1518 | 1540 |
| 1566 | 1588 |
| 1603 | 1620 |
| 1657 | 1679 |
| 1689 | 1711 |
| 1765 | 1787 |
| 1797 | 1819 |
| 1832 | 1854 |
| 1859 | 1881 |
| 1902 | 1924 |
| Hydropathy |
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