| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G430936_T01 |
| Family | GH18 |
| Protein Properties | Length: 300 Molecular Weight: 31961.2 Isoelectric Point: 6.2613 |
| Chromosome | Chromosome/Scaffold: 3 Start: 176597396 End: 176598753 |
| Description | chitinase A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH18 | 29 | 248 | 5.7e-28 |
| IAVYWGQNTGEVTLSATCASRRYQFVILAFVSQFGEGRAPRLDLSGHCDDASSGGCSGLSDDIRSCQRRGVKVLLSIGGGEGRYGLSSPADARLVAAYLW NTFLGGTSSSRPLGDAVLDGIDFDIELGRAKFWDNLARDLKDMGKDGDKAVLLSAAPQCPFPDQWDGAAINTGLFDYVWVQFYNNPECQFSSGRNAFLDA WKQWESVPAGQIFLGLPASK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 300 Download |
| MAVARPLAPF QLIAVLSLAL LVTSHAGGIA VYWGQNTGEV TLSATCASRR YQFVILAFVS 60 QFGEGRAPRL DLSGHCDDAS SGGCSGLSDD IRSCQRRGVK VLLSIGGGEG RYGLSSPADA 120 RLVAAYLWNT FLGGTSSSRP LGDAVLDGID FDIELGRAKF WDNLARDLKD MGKDGDKAVL 180 LSAAPQCPFP DQWDGAAINT GLFDYVWVQF YNNPECQFSS GRNAFLDAWK QWESVPAGQI 240 FLGLPASKDA AGTGFVPAGQ LTSQVLPLIK GSPKYGGVML WSKFYDDRTG YSSAIKSHV* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06546 | GH18_CTS3_chitinase | 5.0e-9 | 87 | 284 | 226 | + GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi. | ||
| cd02871 | GH18_chitinase_D-like | 8.0e-14 | 89 | 292 | 257 | + GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. | ||
| COG3469 | COG3469 | 5.0e-14 | 90 | 289 | 232 | + Chitinase [Carbohydrate transport and metabolism] | ||
| pfam00704 | Glyco_hydro_18 | 2.0e-25 | 27 | 286 | 341 | + Glycosyl hydrolases family 18. | ||
| cd02877 | GH18_hevamine_XipI_class_III | 7.0e-131 | 27 | 297 | 280 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY76568.1 | 0 | 4 | 299 | 3 | 297 | hypothetical protein OsI_04514 [Oryza sativa Indica Group] |
| RefSeq | NP_001044871.1 | 0 | 4 | 299 | 3 | 297 | Os01g0860400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002456669.1 | 0 | 10 | 299 | 11 | 300 | hypothetical protein SORBIDRAFT_03g040560 [Sorghum bicolor] |
| RefSeq | XP_002456671.1 | 0 | 5 | 299 | 4 | 297 | hypothetical protein SORBIDRAFT_03g040590 [Sorghum bicolor] |
| RefSeq | XP_002458804.1 | 0 | 5 | 299 | 4 | 299 | hypothetical protein SORBIDRAFT_03g040570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gsj_A | 0 | 27 | 299 | 1 | 271 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 2hvm_A | 0 | 27 | 299 | 1 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 1llo_A | 0 | 27 | 299 | 1 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 1hvq_A | 0 | 27 | 299 | 1 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
| PDB | 1kr0_A | 0 | 27 | 299 | 1 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
