| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G431856_T01 |
| Family | CE8 |
| Protein Properties | Length: 390 Molecular Weight: 41857.8 Isoelectric Point: 9.56 |
| Chromosome | Chromosome/Scaffold: 4 Start: 2050240 End: 2051608 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 80 | 378 | 0 |
| YVVDPSGKGDYTNITAALEDIPVSNTKRVILDLKPGAQFREKLFLNISKPFITFRSDPKKPAVVVWNDTAATNGKDGKPVGTVGSATLAVESDYFTAYGV VFRNDAPLAKPGAKGGQAVAVRLFGTKTQIYNCTIDGGQDTLYDHKGLHYFKGCLIRGSVDFIFGFGRSFYEDCRIESVVKEVAVLTAQQRSKSIEGAID TGFSFKNCSIGGVKGGQIYLGRAWGDSSRVVYSYTKMGEEVVPVGWDGWQIAKPESSGIYYGEFKCFGPGADAKKKKRVGWALDLTEAQAKPFVGTHYV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 390 Download |
| MAQRAVATMT TNKPLLLLAL ASALLGAAPA AANAPGGAFS NWVAMNQQSY ALYAQKSVGD 60 GGKEPLDKKL SEAEKKKVTY VVDPSGKGDY TNITAALEDI PVSNTKRVIL DLKPGAQFRE 120 KLFLNISKPF ITFRSDPKKP AVVVWNDTAA TNGKDGKPVG TVGSATLAVE SDYFTAYGVV 180 FRNDAPLAKP GAKGGQAVAV RLFGTKTQIY NCTIDGGQDT LYDHKGLHYF KGCLIRGSVD 240 FIFGFGRSFY EDCRIESVVK EVAVLTAQQR SKSIEGAIDT GFSFKNCSIG GVKGGQIYLG 300 RAWGDSSRVV YSYTKMGEEV VPVGWDGWQI AKPESSGIYY GEFKCFGPGA DAKKKKRVGW 360 ALDLTEAQAK PFVGTHYVLG DTWIQPPPK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 7.0e-79 | 79 | 386 | 318 | + probable pectinesterase | ||
| PLN02634 | PLN02634 | 1.0e-82 | 81 | 386 | 306 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 2.0e-83 | 81 | 385 | 308 | + pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-102 | 79 | 386 | 309 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 1.0e-105 | 42 | 389 | 349 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22736.1 | 0 | 14 | 388 | 4 | 380 | pectinesterase family protein [Brachypodium distachyon] |
| GenBank | ACF82787.1 | 0 | 1 | 389 | 1 | 389 | unknown [Zea mays] |
| RefSeq | NP_001068464.1 | 0 | 24 | 388 | 32 | 398 | Os11g0683700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001144148.1 | 0 | 1 | 389 | 1 | 389 | hypothetical protein LOC100277001 [Zea mays] |
| RefSeq | XP_002451275.1 | 0 | 33 | 387 | 36 | 395 | hypothetical protein SORBIDRAFT_05g026816 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-30 | 81 | 385 | 10 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-26 | 81 | 385 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 8e-16 | 81 | 373 | 34 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000000000002 | 90 | 388 | 18 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000000000002 | 90 | 388 | 18 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
