| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G447691_T02 |
| Family | CBM43 |
| Protein Properties | Length: 230 Molecular Weight: 25698 Isoelectric Point: 9.0949 |
| Chromosome | Chromosome/Scaffold: 2 Start: 38140570 End: 38141696 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 39 | 116 | 5.1e-27 |
| WCIAKPSASNEILAQNLDYACSQVSCAVIQKGGPCYYPDSPVSRAAVAMNLYYAYSGRHPWNCYFNNSALVVQSDPSK | |||
| Full Sequence |
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| Protein Sequence Length: 230 Download |
| MRGGDRPSAS LQLLSLGLVL LYFFTSGSTV GLVEGQKTWC IAKPSASNEI LAQNLDYACS 60 QVSCAVIQKG GPCYYPDSPV SRAAVAMNLY YAYSGRHPWN CYFNNSALVV QSDPSKYPHS 120 FSLISSQILR PSICLLIECR FPLVSHRLWL LHILLRRSVR RSGETRRGER SIRAWRWRLH 180 CICMQSLGFL VSTANLPNAH CCVVLCCVAV LQLTFRSELV DTPFRIHVL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-17 | 38 | 107 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-27 | 38 | 115 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG26564.1 | 0 | 36 | 115 | 73 | 152 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
| GenBank | ACG36169.1 | 0 | 14 | 115 | 5 | 102 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
| GenBank | ACG39487.1 | 0 | 1 | 115 | 1 | 115 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
| RefSeq | NP_001132681.1 | 0 | 87 | 229 | 1 | 143 | hypothetical protein LOC100194159 [Zea mays] |
| RefSeq | XP_002446660.1 | 0 | 2 | 115 | 3 | 115 | hypothetical protein SORBIDRAFT_06g020000 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-18 | 38 | 115 | 12 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
