| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G448834_T01 |
| Family | GT47 |
| Protein Properties | Length: 361 Molecular Weight: 41183.2 Isoelectric Point: 6.5064 |
| Chromosome | Chromosome/Scaffold: 3 Start: 157084881 End: 157088122 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 1 | 288 | 0 |
| MPRKYNRMLLDKDSRCLHHMFAAEIFMHQFLLSSAVRTLDPEEADWFYTPAYTTCDLTPQGFPLPFRAPRIMRSAIRYVATTWPFWNRTDGADHFFLTPH DFGACFHYQEERAMERGILPLLRRATLVQTFGQRNHVCLQDGSITVPPYADPGKMQAHLISPGTPRSIFVYFRGLFYDMGNDPEGGYYARGARASVWENF KDNPLFDISTEHPSTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEDISVFVAERDVPRLDSILTSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MPRKYNRMLL DKDSRCLHHM FAAEIFMHQF LLSSAVRTLD PEEADWFYTP AYTTCDLTPQ 60 GFPLPFRAPR IMRSAIRYVA TTWPFWNRTD GADHFFLTPH DFGACFHYQE ERAMERGILP 120 LLRRATLVQT FGQRNHVCLQ DGSITVPPYA DPGKMQAHLI SPGTPRSIFV YFRGLFYDMG 180 NDPEGGYYAR GARASVWENF KDNPLFDIST EHPSTYYEDM QRAIFCLCPL GWAPWSPRLV 240 EAVVFGCIPV IIADDIVLPF ADAIPWEDIS VFVAERDVPR LDSILTSIPL PDILRRQRLL 300 ARDSVKQALL FHQPARPGDA FHQVLNGLAR KLPHGEGVFL QPGEKALDWD AGLQSDLKPW 360 * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-75 | 1 | 288 | 296 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG43504.1 | 0 | 1 | 360 | 61 | 420 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| GenBank | ACN31576.1 | 0 | 1 | 360 | 53 | 412 | unknown [Zea mays] |
| GenBank | ACR34554.1 | 0 | 1 | 360 | 53 | 412 | unknown [Zea mays] |
| GenBank | EAY77054.1 | 0 | 1 | 360 | 63 | 422 | hypothetical protein OsI_05011 [Oryza sativa Indica Group] |
| RefSeq | XP_002459015.1 | 0 | 1 | 360 | 56 | 415 | hypothetical protein SORBIDRAFT_03g044510 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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