| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G448834_T02 |
| Family | GT47 |
| Protein Properties | Length: 418 Molecular Weight: 46793.6 Isoelectric Point: 6.2706 |
| Chromosome | Chromosome/Scaffold: 3 Start: 157084930 End: 157088115 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 50 | 345 | 0 |
| KLKVFVYEMPRKYNRMLLDKDSRCLHHMFAAEIFMHQFLLSSAVRTLDPEEADWFYTPAYTTCDLTPQGFPLPFRAPRIMRSAIRYVATTWPFWNRTDGA DHFFLTPHDFGACFHYQEERAMERGILPLLRRATLVQTFGQRNHVCLQDGSITVPPYADPGKMQAHLISPGTPRSIFVYFRGLFYDMGNDPEGGYYARGA RASVWENFKDNPLFDISTEHPSTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEDISVFVAERDVPRLDSILTSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 418 Download |
| MGAHATAAAA AVLLVATCVA AAAAAPLQQH EPGRISGDAV GVLDDDPVGK LKVFVYEMPR 60 KYNRMLLDKD SRCLHHMFAA EIFMHQFLLS SAVRTLDPEE ADWFYTPAYT TCDLTPQGFP 120 LPFRAPRIMR SAIRYVATTW PFWNRTDGAD HFFLTPHDFG ACFHYQEERA MERGILPLLR 180 RATLVQTFGQ RNHVCLQDGS ITVPPYADPG KMQAHLISPG TPRSIFVYFR GLFYDMGNDP 240 EGGYYARGAR ASVWENFKDN PLFDISTEHP STYYEDMQRA IFCLCPLGWA PWSPRLVEAV 300 VFGCIPVIIA DDIVLPFADA IPWEDISVFV AERDVPRLDS ILTSIPLPDI LRRQRLLARD 360 SVKQALLFHQ PARPGDAFHQ VLNGLARKLP HGEGVFLQPG EKALDWDAGL QSDLKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 2.0e-80 | 50 | 345 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG43504.1 | 0 | 29 | 417 | 32 | 420 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| GenBank | ACN31576.1 | 0 | 10 | 417 | 6 | 412 | unknown [Zea mays] |
| GenBank | ACR34554.1 | 0 | 10 | 417 | 6 | 412 | unknown [Zea mays] |
| RefSeq | NP_001045262.1 | 0 | 28 | 417 | 35 | 422 | Os01g0926400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459015.1 | 0 | 5 | 417 | 4 | 415 | hypothetical protein SORBIDRAFT_03g044510 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
