| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G470309_T01 |
| Family | GT47 |
| Protein Properties | Length: 586 Molecular Weight: 65064 Isoelectric Point: 8.8669 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9648100 End: 9650113 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 72 | 426 | 0 |
| CRGRYIYVYDLPPRFNTDIIRDCRKAGGRWADMCAFLSNGGLGRPLADDGMDGVVTGKAGWYNTHELALDAIFHNRMKQYECLTNRSAAASAVFVPFYAG FDSLRYRVGYDKATRDAASADLSFWLTVQPQWGRMAGRDHFLVAGRTGWDFRRRSGADANTDRGNGLLLTPAGRNMSLLVLESTLEHGSDFSVPYPTYFH PRSDADVLRWQARVRAQHRTWLMAFVGAPRRNVPTSTWVRDHVIAQCKACSACAMPGCARSPGSAQCHSPASIVRLFEKAIFCLQPPGDDGSSTRRSVFD SMVAGCIPVFFHTASAYKQYRWHLPRDDHLRYSVFIPDADVRWRNVSIEAVLRAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MQPSIANSTM QLPAHSARKA GGSARSRRAV QSKGSCSLRN LAILAMVAWS FFLYLHFSLI 60 SGAEEVSNGD PCRGRYIYVY DLPPRFNTDI IRDCRKAGGR WADMCAFLSN GGLGRPLADD 120 GMDGVVTGKA GWYNTHELAL DAIFHNRMKQ YECLTNRSAA ASAVFVPFYA GFDSLRYRVG 180 YDKATRDAAS ADLSFWLTVQ PQWGRMAGRD HFLVAGRTGW DFRRRSGADA NTDRGNGLLL 240 TPAGRNMSLL VLESTLEHGS DFSVPYPTYF HPRSDADVLR WQARVRAQHR TWLMAFVGAP 300 RRNVPTSTWV RDHVIAQCKA CSACAMPGCA RSPGSAQCHS PASIVRLFEK AIFCLQPPGD 360 DGSSTRRSVF DSMVAGCIPV FFHTASAYKQ YRWHLPRDDH LRYSVFIPDA DVRWRNVSIE 420 AVLRAIPPST VERMREEVIR LIPTLLYADP RSKLETLKDA VDVAIEGILD TVTRIKNGEQ 480 VNCCGPVDKD PPNLFAATAS RIPPKGAMRA VDQNRSAELR QPCRSFSYLR AYVQVDLVTS 540 EPREIEGLCS LNQPLAFPDP HGPWHSVAAQ VTYFRSDSNI EGLYL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-58 | 71 | 426 | 366 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001048943.1 | 0 | 16 | 478 | 19 | 481 | Os03g0144300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465869.1 | 0 | 16 | 510 | 21 | 523 | hypothetical protein SORBIDRAFT_01g047310 [Sorghum bicolor] |
| RefSeq | XP_002468519.1 | 0 | 38 | 510 | 12 | 484 | hypothetical protein SORBIDRAFT_01g047290 [Sorghum bicolor] |
| RefSeq | XP_002468520.1 | 0 | 61 | 510 | 39 | 478 | hypothetical protein SORBIDRAFT_01g047300 [Sorghum bicolor] |
| RefSeq | XP_002468521.1 | 0 | 13 | 515 | 1 | 510 | hypothetical protein SORBIDRAFT_01g047315 [Sorghum bicolor] |
