| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM5G828603_T01 |
| Family | GH35 |
| Protein Properties | Length: 599 Molecular Weight: 66725.6 Isoelectric Point: 8.5071 |
| Chromosome | Chromosome/Scaffold: 3 Start: 201769901 End: 201774206 |
| Description | RAN GTPase activating protein 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 273 | 353 | 4e-21 |
| LHFHNNMTRDEVELNKQISCTLPLTNKTNKQVTFKFKYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNIRQPKYGHLKDLH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 599 Download |
| MREMISRSTQ GNGETHGEEV SGIKDVVTQK DTTKPTNIDL MPRCGVTEDD TRRGPAKRHL 60 RPPTPGTGAQ AHRRHELYAK ESSKMMLEVL RKGPRTTAEL EAPVADTSLV SADAPRVLAD 120 IVLDISGGEH AFIEADETKE LLSPLTKPGN SYKRICFSNR SFGIGAANVA GPILDSVKNQ 180 LTKVDISDFV AGRSEDEALD VMRIFSKALE GSVLRYLNIS DNALGEKDVR AFNELLKSQE 240 SLEELYVMND GISEEAAKAL YELIPATEKL KVLHFHNNMT RDEVELNKQI SCTLPLTNKT 300 NKQVTFKFKY HGGTNFGRTS GGPYITTSYD YDAPLDEYGN IRQPKYGHLK DLHDLIRSME 360 KILVHGKYND TSYGKNAIFV DRDVKVTLSG GTHLVPAWSV SILPDCKTVA YNTAKIKTQT 420 SVMVKKANSV EKEPEALRWS WMPENLKPFM TDHRDSFRHS QLLEQITTST DQSDYLWYRT 480 SLEHKGEGSY TLYVNTSGHE MAKLLGRWSV RLPAPVSGEA PLRKELRFSP QRHSRTQGQN 540 YSADGAFVFQ LQSPVKLHSG KNYVSLLSGT VGLKSAKTLV IVVENPDKFR VVAFSAHF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5238 | RNA1 | 0.004 | 137 | 263 | 135 | + Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | ||
| PLN02696 | PLN02696 | 0.0001 | 511 | 596 | 91 | + 1-deoxy-D-xylulose-5-phosphate reductoisomerase | ||
| pfam13943 | WPP | 9.0e-6 | 76 | 103 | 28 | + WPP domain. | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-20 | 310 | 353 | 47 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 2.0e-45 | 308 | 573 | 290 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG32377.1 | 0 | 56 | 283 | 68 | 285 | ran GTPase activating protein [Zea mays] |
| GenBank | ACL52836.1 | 0 | 56 | 283 | 68 | 285 | unknown [Zea mays] |
| GenBank | ACN27651.1 | 0 | 308 | 575 | 290 | 547 | unknown [Zea mays] |
| RefSeq | NP_001130411.1 | 0 | 56 | 283 | 68 | 285 | hypothetical protein LOC100191507 [Zea mays] |
| RefSeq | XP_002457961.1 | 0 | 308 | 583 | 295 | 559 | hypothetical protein SORBIDRAFT_03g023500 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.005 | 301 | 352 | 269 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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