| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM5G858249_T01 |
| Family | CBM43 |
| Protein Properties | Length: 325 Molecular Weight: 33437.1 Isoelectric Point: 4.8888 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14176514 End: 14178456 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 235 | 317 | 1.1e-32 |
| WCVARAGASDAELQADLDYACSQVGVDCSAIQPGGACFEPNTVRAHAAYAVNQLYQAAGRHPWNCDFRASATLTSDDPSYGAC | |||
| GH17 | 1 | 208 | 0 |
| MQNLRAAAAAAGGGAAGIRFSTVNTMGVMAQSDPPSTGAFHPDVAPQLQQILGFLSRTGAPFMINPYPWFAYQSDPRPDTLAFCLFQPNAGRVDGGSKIR YTNMFDAQLDAVKSALVRAGYGDVDVVVAETGWPTRGDAGEPGATAENARAYVSNLVAHLRSGAGTPLMPGKAVETYLFALYDEDLKPGPTSERSFGLYH TDLSMAYD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 325 Download |
| MQNLRAAAAA AGGGAAGIRF STVNTMGVMA QSDPPSTGAF HPDVAPQLQQ ILGFLSRTGA 60 PFMINPYPWF AYQSDPRPDT LAFCLFQPNA GRVDGGSKIR YTNMFDAQLD AVKSALVRAG 120 YGDVDVVVAE TGWPTRGDAG EPGATAENAR AYVSNLVAHL RSGAGTPLMP GKAVETYLFA 180 LYDEDLKPGP TSERSFGLYH TDLSMAYDAG LASSAAAGGR GGGGGGAAQP RGGGWCVARA 240 GASDAELQAD LDYACSQVGV DCSAIQPGGA CFEPNTVRAH AAYAVNQLYQ AAGRHPWNCD 300 FRASATLTSD DPSYGACVYT GGGQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-7 | 122 | 202 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-20 | 235 | 306 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-38 | 235 | 319 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-57 | 18 | 208 | 191 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26761.1 | 0 | 1 | 324 | 1 | 323 | unknown [Zea mays] |
| GenBank | EAY91326.1 | 0 | 1 | 322 | 139 | 463 | hypothetical protein OsI_12942 [Oryza sativa Indica Group] |
| RefSeq | NP_001141090.1 | 0 | 1 | 324 | 1 | 324 | hypothetical protein LOC100273173 [Zea mays] |
| RefSeq | NP_001148381.1 | 0 | 1 | 324 | 139 | 461 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
| RefSeq | XP_002466692.1 | 0 | 1 | 324 | 147 | 475 | hypothetical protein SORBIDRAFT_01g012380 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 7.00005e-41 | 1 | 212 | 113 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3f55_C | 7.00005e-41 | 1 | 212 | 113 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3f55_B | 7.00005e-41 | 1 | 212 | 113 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3f55_A | 7.00005e-41 | 1 | 212 | 113 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3em5_D | 7.00005e-41 | 1 | 212 | 113 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| Hydropathy |
|---|
 |
