| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM5G865819_T01 |
| Family | GT47 |
| Protein Properties | Length: 680 Molecular Weight: 76537.5 Isoelectric Point: 8.4787 |
| Chromosome | Chromosome/Scaffold: 9 Start: 152205183 End: 152208275 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 113 | 463 | 0 |
| CRGRYVYMHDLPPRFNADIVRDCRKTEDHWGDMCGFVSNAGLGRPLAADDDGVITGEAGWYGTHQFALDAIFHNRMKQYECLTNHSAVASAVFVPFYAGF DFARYHWGYDNATRDAASADLMEWLMARPQWRRKWGHDHFLVAGRTGWDFRRSSNVNPDWGTDLLDMPAGRNMTVLVLESTLKYTSDFSVPYPTYFHPRS DADVLRWQDRVRGRRRTWLMAFVGAPRPDVPMSIRIRDHVIAQCRASSACAMLGCARTLGSTQCHTPASIMRLFQKSVFCLQPPGDSCTRRSVFDSMVAG CIPVFFHTGSAYEQYPWHLPRDDGHLRYSVFIPDADVRRRNVSVEAVLRAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 680 Download |
| MKRSAANTIV QLVRHILRFP PSNPILPKLS SSWSFCCFTL AKSARKAGGG ARSRRAVGVE 60 AAAAKVLPRL RILAVLAVVA WTFFLYYVHF TVISSSTVEV GNGDEDGGAA DPCRGRYVYM 120 HDLPPRFNAD IVRDCRKTED HWGDMCGFVS NAGLGRPLAA DDDGVITGEA GWYGTHQFAL 180 DAIFHNRMKQ YECLTNHSAV ASAVFVPFYA GFDFARYHWG YDNATRDAAS ADLMEWLMAR 240 PQWRRKWGHD HFLVAGRTGW DFRRSSNVNP DWGTDLLDMP AGRNMTVLVL ESTLKYTSDF 300 SVPYPTYFHP RSDADVLRWQ DRVRGRRRTW LMAFVGAPRP DVPMSIRIRD HVIAQCRASS 360 ACAMLGCART LGSTQCHTPA SIMRLFQKSV FCLQPPGDSC TRRSVFDSMV AGCIPVFFHT 420 GSAYEQYPWH LPRDDGHLRY SVFIPDADVR RRNVSVEAVL RAIPPPTVER MRQEVIRLIP 480 TLLYADPRSK LETLKDAVDV AIDGILDTMA GTKDTPSLFA AIFSRNCFVA PPVQPTRSSK 540 GPLWARIRND EDDDSGGRVT EDPPDLFAST ESRFRFRPIE QLRCSIVIGS WDHVVDLSVR 600 PLHMIHQATA HQHVRLFPPH KLTDIKNYPS FNLRKEGVRV EVLEWIAELD PLEELQEAWL 660 QIKGIPLHDD AIGKFLLGR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 4.0e-60 | 112 | 463 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO17347.1 | 0 | 39 | 513 | 159 | 623 | Hypothetical protein [Oryza sativa Japonica Group] |
| RefSeq | NP_001048943.1 | 0 | 40 | 513 | 16 | 479 | Os03g0144300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465869.1 | 0 | 39 | 574 | 17 | 515 | hypothetical protein SORBIDRAFT_01g047310 [Sorghum bicolor] |
| RefSeq | XP_002468519.1 | 0 | 59 | 583 | 1 | 483 | hypothetical protein SORBIDRAFT_01g047290 [Sorghum bicolor] |
| RefSeq | XP_002468520.1 | 0 | 55 | 525 | 2 | 469 | hypothetical protein SORBIDRAFT_01g047300 [Sorghum bicolor] |
