| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM5G877941_T01 |
| Family | AA4 |
| Protein Properties | Length: 556 Molecular Weight: 60134.5 Isoelectric Point: 6.9201 |
| Chromosome | Chromosome/Scaffold: 2 Start: 234092343 End: 234102994 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA4 | 96 | 320 | 4e-26 |
| QEFIDELASFLGDNITLDYEERSFHGTPQNSFHKAVNLPDVVVFPSSQDEVQRIVMACNKHKVPIVPYGGATSIEGHTLAPHGGVCIDMTLMKKIKSLNV EDMDVVVEPGVGWIELNEYLKPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLRAVLPNGDVVKTGSRARKSAAGYDLARLIIGSEGTLG VITEVTLRLQKLPSHSVVAMCNFKT | |||
| Full Sequence |
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| Protein Sequence Length: 556 Download |
| MATSLLRLSR HRRALLAISS VRLALSTQPH VPSPSPSPTP SSARRLPHFL SFLAAAAAAA 60 AGGATVALCD SGLDHRVGGK DSADLVVRGE RKFVPQEFID ELASFLGDNI TLDYEERSFH 120 GTPQNSFHKA VNLPDVVVFP SSQDEVQRIV MACNKHKVPI VPYGGATSIE GHTLAPHGGV 180 CIDMTLMKKI KSLNVEDMDV VVEPGVGWIE LNEYLKPYGL FFPLDPGPGA TIGGMCATRC 240 SGSLAVRYGT MRDNVINLRA VLPNGDVVKT GSRARKSAAG YDLARLIIGS EGTLGVITEV 300 TLRLQKLPSH SVVAMCNFKT IKDAADVAIA TMLSGIQVSR VELLDEVQIK AINMANGKNL 360 PEVPTLMFEF IGTEAYALEQ TLLVQKIATE HHGSDFVFVE EPDAKAELWK IRKEALWAGF 420 AMKPDHEAMI TDVCVPLSRL AECISTSKRL LDASPLTCLV IAHAGDGNFH TIILFDPSQE 480 DQRKEAERLN HFMVHTALSM EGTCTGEHGV GTGKMKYLEK ELGIESLRTM KRIKAALDPN 540 NIMNPGKLIP PHVCI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 8.0e-51 | 133 | 554 | 427 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 4.0e-66 | 307 | 548 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 5.0e-94 | 137 | 547 | 415 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 1.0e-119 | 101 | 551 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 43 | 555 | 515 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC81560.1 | 0 | 45 | 555 | 52 | 551 | hypothetical protein OsI_24999 [Oryza sativa Indica Group] |
| GenBank | EEE66611.1 | 0 | 68 | 555 | 71 | 548 | hypothetical protein OsJ_23188 [Oryza sativa Japonica Group] |
| RefSeq | NP_001142976.1 | 0 | 1 | 555 | 1 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | XP_002461502.1 | 0 | 1 | 555 | 1 | 574 | hypothetical protein SORBIDRAFT_02g003640 [Sorghum bicolor] |
| RefSeq | XP_002524111.1 | 0 | 38 | 555 | 31 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 1e-39 | 97 | 549 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 1e-39 | 97 | 549 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 1e-39 | 97 | 549 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 1e-39 | 97 | 549 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 1e-39 | 97 | 549 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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