| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01000073001 |
| Family | GH2 |
| Protein Properties | Length: 952 Molecular Weight: 108062 Isoelectric Point: 6.6775 |
| Chromosome | Chromosome/Scaffold: 14 Start: 3221376 End: 3234013 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 38 | 759 | 0 |
| TSPWMEAVVPGTVLATLVKNKLVPDPFYGLENESILDIADAGREYYTFWFFRTFHCKLSGNQHVDLNFRAINYYAEVYLNGHKMVLPEGMFRRHSLDVTD VLHPDKQNLLAVLVHPPNHPGTIPPEGGQGGDHEIGKDIAAQYVEGWDWMAPIRDRNTGIWDEVSISVTGPVKIIDPHLVASFFDNYKRVYLHSTIELEN RSSWVADCALNIQVSTELEEGICLVEHLQTQHLSISPSARVQYSFPELFFYKPNLWWPNGMGKQSLYNVSITVDVKGHGESDSWSHPFGFRKIESHIDNA TGGRLFKVNGQPIFIRGGNWILSDGLLRLSKKRYKADIKFHADMNFNMIRCWGGGLAERPEFYDYCDIYGLLVWQEFWITGDCDGRGIPVSNPDGPLDHQ LFLLCARDTVKLLRNHPSLALWVGGNEQTPPHDINMALKYDLRLHPDFAKLDENGQSIEDLSPILRDPSQYLDGTRIYIQGSMWDGFANGKGDFTDGPYE IQNPESFFKDDFYKYGFNPEVGSVGMPVAATIRATMPPEGWQIPLFKKLPDGYIEEVPNPMWEYHKYIPYSKPSSVHDQVLMYGTPKDLDDFCLKAQLVN YIQYRALLEGWTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLHDQTAGFYGCRSAAEPIHVQLNLATYFIEVVNTTSETLSNIGIEASVWDLEGTCPYYK VYDKLSVPPKKTVPIIEMKYPK | |||
| Full Sequence |
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| Protein Sequence Length: 952 Download |
| MAEIGKTKLD SGWVAARSTD IQLTGTQLTT THPPAGPTSP WMEAVVPGTV LATLVKNKLV 60 PDPFYGLENE SILDIADAGR EYYTFWFFRT FHCKLSGNQH VDLNFRAINY YAEVYLNGHK 120 MVLPEGMFRR HSLDVTDVLH PDKQNLLAVL VHPPNHPGTI PPEGGQGGDH EIGKDIAAQY 180 VEGWDWMAPI RDRNTGIWDE VSISVTGPVK IIDPHLVASF FDNYKRVYLH STIELENRSS 240 WVADCALNIQ VSTELEEGIC LVEHLQTQHL SISPSARVQY SFPELFFYKP NLWWPNGMGK 300 QSLYNVSITV DVKGHGESDS WSHPFGFRKI ESHIDNATGG RLFKVNGQPI FIRGGNWILS 360 DGLLRLSKKR YKADIKFHAD MNFNMIRCWG GGLAERPEFY DYCDIYGLLV WQEFWITGDC 420 DGRGIPVSNP DGPLDHQLFL LCARDTVKLL RNHPSLALWV GGNEQTPPHD INMALKYDLR 480 LHPDFAKLDE NGQSIEDLSP ILRDPSQYLD GTRIYIQGSM WDGFANGKGD FTDGPYEIQN 540 PESFFKDDFY KYGFNPEVGS VGMPVAATIR ATMPPEGWQI PLFKKLPDGY IEEVPNPMWE 600 YHKYIPYSKP SSVHDQVLMY GTPKDLDDFC LKAQLVNYIQ YRALLEGWTS RMWSKYTGVL 660 IWKTQNPWTG LRGQFYDHLH DQTAGFYGCR SAAEPIHVQL NLATYFIEVV NTTSETLSNI 720 GIEASVWDLE GTCPYYKVYD KLSVPPKKTV PIIEMKYPKS KNPKAVYFLL LKLYNMSNYG 780 ILSRNFYWLH LSGGDYKLLE PYRSKKIPLK ITSKVFITGS TYEIQMHVQN TSKKPDSLKP 840 VHSRMEEKHG VGVLQRICSR FSKEAAGLKV VQMNGADVGV AFFLHFSVHV SKKEHKAGED 900 TRILPVHYSD NYFSLVPGET MPITITFEVP PGVTPRVTLN GWNNHSDYTV Y* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-9 | 84 | 161 | 79 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| pfam00703 | Glyco_hydro_2 | 9.0e-10 | 209 | 328 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10150 | PRK10150 | 2.0e-10 | 85 | 464 | 407 | + beta-D-glucuronidase; Provisional | ||
| PRK10340 | ebgA | 2.0e-15 | 98 | 464 | 382 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 1.0e-40 | 43 | 670 | 655 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82620.1 | 0 | 1 | 951 | 1 | 973 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 1 | 951 | 1 | 951 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 951 | 1 | 973 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 1 | 951 | 1 | 973 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 950 | 1 | 972 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 34 | 789 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 34 | 789 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 34 | 789 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 386 | 372 | 752 | 0 |
| EE075788 | 267 | 399 | 665 | 0 |
| ES832790 | 313 | 490 | 802 | 0 |
| GO871600 | 333 | 300 | 632 | 0 |
| DY284833 | 299 | 2 | 300 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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