| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01000128001 |
| Family | CBM43 |
| Protein Properties | Length: 358 Molecular Weight: 38486 Isoelectric Point: 4.9735 |
| Chromosome | Chromosome/Scaffold: 7 Start: 15497543 End: 15499633 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 30 | 170 | 1.9e-25 |
| LLTLYDSSPVVLQAMSHTGVPIAVSVSEDDLNEVSGSVLMAESWIRTHVLAHYPSTNITTIVVGNTVLCNKDKEDKLRLVLPSLRNVYYSLTRWGLEKDI KVSAAFSSNCLNPDSVLDRDDLADKVIKPLLSFLELTNSTY | |||
| CBM43 | 270 | 352 | 2.5e-33 |
| WCVAKPSVPADTLQEAMDYACGGGGADCEEIEPHGNCYYPDTVLAHASYAFNSYWQKHKKNGGTCSFGGTAMLINADPSFLHC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 358 Download |
| MLKMGSLFHI IIFFLTFLVL TGSSSESVEL LTLYDSSPVV LQAMSHTGVP IAVSVSEDDL 60 NEVSGSVLMA ESWIRTHVLA HYPSTNITTI VVGNTVLCNK DKEDKLRLVL PSLRNVYYSL 120 TRWGLEKDIK VSAAFSSNCL NPDSVLDRDD LADKVIKPLL SFLELTNSTY SVHPPTNFSP 180 LPTPLPELSP SPIYSSIGFS APANVAKNPL PPLPPLEGTA SPPPMTFPFA PEMPPIVIPA 240 SPPYSFSLPP CSPFEAGAPA PETGVKQGLW CVAKPSVPAD TLQEAMDYAC GGGGADCEEI 300 EPHGNCYYPD TVLAHASYAF NSYWQKHKKN GGTCSFGGTA MLINADPSFL HCRFLHS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-7 | 23 | 168 | 158 | + Glycosyl hydrolases family 17. | ||
| pfam07983 | X8 | 2.0e-25 | 269 | 341 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-40 | 269 | 354 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33700.1 | 0 | 1 | 357 | 1 | 357 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI36295.1 | 0 | 1 | 181 | 1 | 181 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_201547.1 | 0 | 11 | 357 | 7 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
| RefSeq | XP_002279597.1 | 0 | 1 | 357 | 1 | 413 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525263.1 | 0 | 1 | 353 | 1 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-18 | 268 | 354 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2cyg_A | 0.000000000000008 | 25 | 163 | 24 | 162 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 4gzj_A | 0.000000004 | 19 | 167 | 20 | 170 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 4gzi_A | 0.000000004 | 19 | 167 | 20 | 170 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
| PDB | 3ur8_B | 0.000000004 | 19 | 167 | 20 | 170 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
