| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01003344001 |
| Family | GH5 |
| Protein Properties | Length: 450 Molecular Weight: 50941.7 Isoelectric Point: 5.4718 |
| Chromosome | Chromosome/Scaffold: Start: 9195281 End: 9199203 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 59 | 387 | 9.8e-32 |
| SHQSTLYINGWNSYWLMEESVWAPSRSRVSNMLRRGAEMGMSVCRTWAFNDGDGPNSLQISPGVFNERVFQGLDYVIVEARRHQVRLILSLVNNLNAYGG KAQYVRWAQEAGINVSSSTDSFFSHPTIKDYYKAYIKAVVTRKNSLSGVKYSEEPAIFAWELMNEPRCASSSSAPILQAWITEMAAYIKSLDQKHLVTVG LEGFYGLKTTERSGVNPGDWASKLGSDFIQNSAIDDIDFASVHAYPDSWLPDADLEEKANFLSHWVDSHISDGEYVLKKPVLFTEVGSIMHRKKQGLYDT DTFLKTVYDKIYESAKKRQAGAGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 450 Download |
| MEGEWKQKRL YPLLGTLSIL LFLYFNFSDY FNFPVLWLPA IGFVGTNSTK FVIVEPDGSH 60 QSTLYINGWN SYWLMEESVW APSRSRVSNM LRRGAEMGMS VCRTWAFNDG DGPNSLQISP 120 GVFNERVFQG LDYVIVEARR HQVRLILSLV NNLNAYGGKA QYVRWAQEAG INVSSSTDSF 180 FSHPTIKDYY KAYIKAVVTR KNSLSGVKYS EEPAIFAWEL MNEPRCASSS SAPILQAWIT 240 EMAAYIKSLD QKHLVTVGLE GFYGLKTTER SGVNPGDWAS KLGSDFIQNS AIDDIDFASV 300 HAYPDSWLPD ADLEEKANFL SHWVDSHISD GEYVLKKPVL FTEVGSIMHR KKQGLYDTDT 360 FLKTVYDKIY ESAKKRQAGA GALIWQLLVE GMEEYSDQFS IVAWDYPSTH ELIIEQSCRL 420 RSVFAEGQVE RKLQHGDLCF GKEAMNLEI* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.001 | 163 | 387 | 238 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 2.0e-20 | 97 | 262 | 166 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77937.1 | 0 | 1 | 442 | 1 | 444 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI33116.1 | 0 | 1 | 449 | 1 | 449 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272403.1 | 0 | 1 | 442 | 1 | 444 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307872.1 | 0 | 41 | 432 | 1 | 393 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520563.1 | 0 | 1 | 437 | 1 | 439 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 43 | 423 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 2.8026e-45 | 56 | 415 | 16 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 2.8026e-45 | 56 | 415 | 16 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 2.8026e-45 | 56 | 415 | 16 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 2.8026e-45 | 56 | 415 | 16 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
