| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01003349001 |
| Family | GH5 |
| Protein Properties | Length: 452 Molecular Weight: 51077.7 Isoelectric Point: 5.6457 |
| Chromosome | Chromosome/Scaffold: Start: 9242792 End: 9247072 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 59 | 389 | 2e-31 |
| SHQSTLYINGWNSYWLMEESVWGPSRSRVSNMLRRGAEMGMSVCRTWAFNDGDGPNSLQISPGVFNERVFQGLDYVIFEARRHQVRLILSLVNNLNAYGG KAQYVRWAQEAGINVSSSTDSFFSHPTIKDYYKAYIKAVVTRKNSLSGVKYSEEPAIFGWELMNEPRCASSSSAPILQAWITEMAAFIKSLDQKHLVTVG LEGFYGLKTTERSGVNPGDWASKLGSDFIQNSAIDDIDFASVHAYPDSWLPDADLEEKANFLSHWVDSHISDGEYVLKKPVLFTEVGSIMHRKKQGLYDT DTFLKTVYDKIYESAKKRQAGAGAGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 452 Download |
| MEGEWKQKRL YPLLGTLSIL LFLYFNFSDY FNFPVLWLPA IGFVGTNSTK FVIVEPDGSH 60 QSTLYINGWN SYWLMEESVW GPSRSRVSNM LRRGAEMGMS VCRTWAFNDG DGPNSLQISP 120 GVFNERVFQG LDYVIFEARR HQVRLILSLV NNLNAYGGKA QYVRWAQEAG INVSSSTDSF 180 FSHPTIKDYY KAYIKAVVTR KNSLSGVKYS EEPAIFGWEL MNEPRCASSS SAPILQAWIT 240 EMAAFIKSLD QKHLVTVGLE GFYGLKTTER SGVNPGDWAS KLGSDFIQNS AIDDIDFASV 300 HAYPDSWLPD ADLEEKANFL SHWVDSHISD GEYVLKKPVL FTEVGSIMHR KKQGLYDTDT 360 FLKTVYDKIY ESAKKRQAGA GAGALIWQLL VEGMEEYSDQ FSIVAWDYPS THELIIEQSC 420 RLRSVFAEGQ VERKLQHGDL CFGKVFNNSN E* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 0.005 | 31 | 225 | 214 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 0.001 | 163 | 306 | 152 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-19 | 97 | 262 | 166 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77937.1 | 0 | 1 | 451 | 1 | 451 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI33116.1 | 0 | 1 | 444 | 1 | 442 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272403.1 | 0 | 1 | 451 | 1 | 451 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307872.1 | 0 | 41 | 434 | 1 | 393 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520563.1 | 0 | 1 | 439 | 1 | 439 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 43 | 425 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 2.00386e-43 | 56 | 419 | 16 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 2.00386e-43 | 56 | 419 | 16 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 2.00386e-43 | 56 | 419 | 16 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 2.00386e-43 | 56 | 419 | 16 | 380 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
