| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01003706001 |
| Family | GT5 |
| Protein Properties | Length: 770 Molecular Weight: 87552.5 Isoelectric Point: 6.4733 |
| Chromosome | Chromosome/Scaffold: 7 Start: 15166126 End: 15197600 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 55 | 225 | 4.4e-38 |
| HIVHICTEMVPVVSVGSLASYVTGLSHALQRQGNLVEVILPKYASLDLDEVQGLREIEAEFYSYFNGQLQGNRIWTGVVYGIGVTFIQPVHYSTFFTRER LYGYPDDFERFSYFSRASLDYIVKSGKQPDVLHIHNWETAIVGPLFWDVFVKQVQLRIKFICSIHSGSPFS | |||
| GT5 | 492 | 753 | 1.8e-40 |
| LQGGVVYSNKVVIMSSMHSKASIIHSLSHGLESTFTIHKDKLLIAPYGFDKFTWDPSRDKFLPENYTADNMKGKAVCKVALQQHLGLTEHASVILVGCIF SEVSDVDVENLKEVVLIASRRDVQFVFTRLSKVPSKNTSLDSFLEEIKDENVRFIDKCDEALSHLIFAGSDIILCPSFHDPMLQVPLKAMRYGAAPIAIT SIGKRFRHVVDHDFQSTKLSQFLNTTFAYMSLNEALDEIKSNSMQWNQKIMDAMTKDFSWDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 770 Download |
| METLINAAIP WAFGFPKFNT SNKHRVKPRT VRCLRKNDEV NRLFEAPSQM ENGFHIVHIC 60 TEMVPVVSVG SLASYVTGLS HALQRQGNLV EVILPKYASL DLDEVQGLRE IEAEFYSYFN 120 GQLQGNRIWT GVVYGIGVTF IQPVHYSTFF TRERLYGYPD DFERFSYFSR ASLDYIVKSG 180 KQPDVLHIHN WETAIVGPLF WDVFVKQVQL RIKFICSIHS GSPFSEIPLF WENDGLHRLS 240 EAEILYKERS KTNLTFYCDL FGDEKEHDEG ENPLQILIGT EPPMGETVES NDSSKRRVIK 300 AVIRSQRVDL FCLQETKIQT LSEGLVRSLG SGRWSNWVAL DALGSIGGML VCWDKRSLEV 360 METEVGNFSI SCRIRNVEDG LTWILTGVKR PFSKKDRDCL WEELGAIRGL WEDPGCLGGD 420 FNVILSQRER NRQGRLTGAM RSFAQTVDEX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 480 XXXSLGFYSK NLQGGVVYSN KVVIMSSMHS KASIIHSLSH GLESTFTIHK DKLLIAPYGF 540 DKFTWDPSRD KFLPENYTAD NMKGKAVCKV ALQQHLGLTE HASVILVGCI FSEVSDVDVE 600 NLKEVVLIAS RRDVQFVFTR LSKVPSKNTS LDSFLEEIKD ENVRFIDKCD EALSHLIFAG 660 SDIILCPSFH DPMLQVPLKA MRYGAAPIAI TSIGKRFRHV VDHDFQSTKL SQFLNTTFAY 720 MSLNEALDEI KSNSMQWNQK IMDAMTKDFS WDAECYDIHI SAYTALKNL* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-26 | 492 | 756 | 287 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02939 | PLN02939 | 4.0e-32 | 493 | 753 | 271 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 5.0e-36 | 54 | 219 | 169 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-36 | 55 | 219 | 170 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02939 | PLN02939 | 3.0e-54 | 52 | 216 | 167 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13789.1 | 4e-21 | 1 | 51 | 1 | 51 | starch synthase V precursor [Vitis vinifera] |
| GenBank | ACD13789.1 | 0 | 52 | 228 | 197 | 374 | starch synthase V precursor [Vitis vinifera] |
| GenBank | ACD13789.1 | 0 | 486 | 769 | 399 | 682 | starch synthase V precursor [Vitis vinifera] |
| EMBL | CBI18615.1 | 0 | 1 | 769 | 1 | 769 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262708.1 | 0 | 486 | 769 | 47 | 330 | PREDICTED: starch synthase V, partial [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0.000000000000004 | 492 | 751 | 235 | 497 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3vue_A | 0.000000000000004 | 492 | 751 | 235 | 497 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 1rzv_B | 0.000000000002 | 492 | 752 | 200 | 462 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_B | 0.006 | 54 | 200 | 1 | 147 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0.000000000002 | 492 | 752 | 200 | 462 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB919961 | 207 | 564 | 770 | 0 |
| CB910705 | 178 | 564 | 741 | 0 |
| EE107528 | 152 | 52 | 203 | 0 |
| DV140721 | 245 | 526 | 770 | 0 |
| DV455772 | 212 | 492 | 703 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
