| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01006161001 |
| Family | GT8 |
| Protein Properties | Length: 383 Molecular Weight: 43628.3 Isoelectric Point: 8.4468 |
| Chromosome | Chromosome/Scaffold: Start: 42295231 End: 42296806 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 21 | 177 | 3.9e-22 |
| QDHFDMRFKLTLNKLYAWSLVDYDRVIMLDSDNLFLQKTDELFQCGQFCAVFINPCIFHTGLFVLQPSMEVFRSMLHELAIGRENRDGADQGFLASYFPD LLDQPMFHQPPNATKLDGNYRLPLGYQMDASYYYLKLRWTIPCGPNSVITFPSAPWL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 383 Download |
| EQEDGAKVVR VKNMNNPYKN QDHFDMRFKL TLNKLYAWSL VDYDRVIMLD SDNLFLQKTD 60 ELFQCGQFCA VFINPCIFHT GLFVLQPSME VFRSMLHELA IGRENRDGAD QGFLASYFPD 120 LLDQPMFHQP PNATKLDGNY RLPLGYQMDA SYYYLKLRWT IPCGPNSVIT FPSAPWLKPW 180 YWWSWPVLPL GLSWHRQRLQ TLGYNAEMPV VLMQWIVYLG VIAMARLARS NLSKLCYRRV 240 EKSSSSIQTG LKLLTLWSIV AAYVLPFFLI PRTVHPLLGW TLYLVGSFAL SSIAMNAFLL 300 PMLAVLTPGL GILGALLVMA FPWYPDGVVR ALVVFAYAFC CAPIAWTSLV KIMTCHQVSP 360 EKEVFFPKLG DSQPSPDPIK LC* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00505 | Glyco_transf_8 | 0.0001 | 30 | 131 | 129 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
| PLN00176 | PLN00176 | 2.0e-5 | 17 | 120 | 141 | + galactinol synthase | ||
| COG5597 | COG5597 | 4.0e-6 | 25 | 120 | 105 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| pfam01501 | Glyco_transf_8 | 7.0e-8 | 14 | 120 | 135 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 3.0e-49 | 2 | 198 | 207 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77033.1 | 0 | 1 | 377 | 49 | 427 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18858.1 | 0 | 1 | 382 | 1 | 382 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_973607.1 | 0 | 1 | 372 | 8 | 379 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
| RefSeq | XP_002269578.1 | 0 | 1 | 382 | 92 | 473 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002269628.1 | 0 | 1 | 382 | 92 | 425 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2x_B | 0.000000000002 | 30 | 118 | 83 | 172 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 3u2x_A | 0.000000000002 | 30 | 118 | 83 | 172 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 3u2v_B | 0.000000000002 | 30 | 118 | 83 | 172 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 3u2v_A | 0.000000000002 | 30 | 118 | 83 | 172 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
| PDB | 3u2u_B | 0.000000000002 | 30 | 118 | 83 | 172 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
