| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01006265001 |
| Family | GH9 |
| Protein Properties | Length: 439 Molecular Weight: 48210.8 Isoelectric Point: 9.0934 |
| Chromosome | Chromosome/Scaffold: Start: 24322883 End: 24325899 |
| Description | Six-hairpin glycosidases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 53 | 402 | 0 |
| VANSSKPDDHYCWMKPEDMDYDRPVQTANSGPDLAGEMAAALAAASIVFQDNTAYSKKLIKGAETLFTFARDFGKRTPYCRGNPYIEPFYNSTGYFDEYM WGAAWLFYATGNKSYISLATNPGLPKNSKAFYMIPDLSVPSWDNKLPAAMLLLTRLRIFLSPGYPYEDMLKSYHNVTGLTMCSYLQQFHVFNWTKGGLIQ LNHGKPQSLQYVANAAFLASLFVDYMNATSIPGWYCGPNFIRAETLRSFATSQINYILGKNPMKMSYLVGYGTKFPKHVHHRGASIPNDNKKYSCTGGWK WRDSRNPNPHNITGAMVGGPIRTDNFQDIRTNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 439 Download |
| MKHPAERDGG GNQVSVSANI GACSAGLVGS CIALFFHDPL ENRRVGPLVG ASVANSSKPD 60 DHYCWMKPED MDYDRPVQTA NSGPDLAGEM AAALAAASIV FQDNTAYSKK LIKGAETLFT 120 FARDFGKRTP YCRGNPYIEP FYNSTGYFDE YMWGAAWLFY ATGNKSYISL ATNPGLPKNS 180 KAFYMIPDLS VPSWDNKLPA AMLLLTRLRI FLSPGYPYED MLKSYHNVTG LTMCSYLQQF 240 HVFNWTKGGL IQLNHGKPQS LQYVANAAFL ASLFVDYMNA TSIPGWYCGP NFIRAETLRS 300 FATSQINYIL GKNPMKMSYL VGYGTKFPKH VHHRGASIPN DNKKYSCTGG WKWRDSRNPN 360 PHNITGAMVG GPIRTDNFQD IRTNYNYTEP TLAGNAGLVA ALVSLTGSGG MSIDKNTIFS 420 AVPPFYPPSP PPPAPWKP* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 6.0e-64 | 61 | 390 | 344 | + endoglucanase | ||
| PLN02613 | PLN02613 | 7.0e-65 | 61 | 391 | 345 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-65 | 61 | 391 | 343 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-93 | 61 | 391 | 336 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 1.0e-99 | 61 | 391 | 342 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54547.1 | 0 | 49 | 422 | 239 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| EMBL | CBI18623.1 | 0 | 1 | 438 | 1 | 438 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266444.1 | 0 | 49 | 438 | 230 | 619 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312211.1 | 0 | 49 | 438 | 231 | 620 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514768.1 | 0 | 44 | 422 | 230 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 1e-35 | 61 | 409 | 123 | 432 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1ksc_A | 1e-35 | 61 | 409 | 123 | 432 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1ks8_A | 1e-35 | 61 | 409 | 123 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 2e-30 | 61 | 405 | 145 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1ia7_A | 8e-28 | 61 | 403 | 125 | 424 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY765225 | 303 | 76 | 376 | 0 |
| HO794674 | 374 | 49 | 422 | 0 |
| HO796213 | 373 | 50 | 422 | 0 |
| FC065292 | 216 | 200 | 415 | 0 |
| BF010444 | 384 | 44 | 422 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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