| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01007371001 |
| Family | GH18 |
| Protein Properties | Length: 1131 Molecular Weight: 126363 Isoelectric Point: 7.9603 |
| Chromosome | Chromosome/Scaffold: Start: 31552754 End: 31561139 |
| Description | cysteine-rich RLK (RECEPTOR-like protein kinase) 34 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH18 | 116 | 299 | 2.5e-33 |
| APLILTMAVHYVPTLYSVSYHIEAIQRNLDWAHIPAYDYYLPSRVNFTHAHAALYDPLSNVSTDFGIREWISKGFPASKLVLGLPYHGYAWTLVNPNHNG IGAPASGIAMTADGSMSYKYIKWFLRSYGATSMYNATYVVNYVTIGTTWIGFDDVQAIRAKISYAKEKKLLGYNVFQVSNDDNW | |||
| GH18 | 422 | 716 | 1.3e-39 |
| AGYWYSGNESPVPDINSALFTHLLCAFAWLDPSAYQIYISPSDEQYFATFTNIVKKRNPSIITLLSIWAGKNDSTKFSSMISQPSYRKSFIESSIKTARL YGFQGLDLSGYWPRTVSNTINMGILFDEWRAAVNSESRDPSQSPLILTLEVHYLPTLGSVSYEVDSIRRNMDWVHVAAYDYYLPSRLPAGKLVLGLAYHG YAWTLLNPKENGIGAPASGLAMTPDGSVSYKYIKWFIRSYECASVYNATYVVNYCSFGATWIGYDDVEAIRTKVSYAKEKGLLGYNVWEVSHDEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1131 Download |
| MAARIVSFLL FFLAFGLPYS HGETWIKAGY WYAGSESPIP DIKSGLFTHL LCAFADINPT 60 TYQLSISSSE EHYFSTFTDV VKRRNPSVVT LLSIWGGKGP TGLSILGERS RNSGKAPLIL 120 TMAVHYVPTL YSVSYHIEAI QRNLDWAHIP AYDYYLPSRV NFTHAHAALY DPLSNVSTDF 180 GIREWISKGF PASKLVLGLP YHGYAWTLVN PNHNGIGAPA SGIAMTADGS MSYKYIKWFL 240 RSYGATSMYN ATYVVNYVTI GTTWIGFDDV QAIRAKISYA KEKKLLGYNV FQVSNDDNWA 300 LSQAAQDDDK DHHKKQELLV KILVPIAVLI LVAGSIMCCY SQSRVLKAIG NFSVENFNSN 360 APNLRVFSFA EIKEATNNFS FENKLGEGGF GPLSSMASKN IALLLFIAFH FRLSNSQTWV 420 KAGYWYSGNE SPVPDINSAL FTHLLCAFAW LDPSAYQIYI SPSDEQYFAT FTNIVKKRNP 480 SIITLLSIWA GKNDSTKFSS MISQPSYRKS FIESSIKTAR LYGFQGLDLS GYWPRTVSNT 540 INMGILFDEW RAAVNSESRD PSQSPLILTL EVHYLPTLGS VSYEVDSIRR NMDWVHVAAY 600 DYYLPSRLPA GKLVLGLAYH GYAWTLLNPK ENGIGAPASG LAMTPDGSVS YKYIKWFIRS 660 YECASVYNAT YVVNYCSFGA TWIGYDDVEA IRTKVSYAKE KGLLGYNVWE VSHDENWVLS 720 LAAQGEDQDE GNKQRLLVII LLPIAIVVLL VSSIMCHRWK GRLIFNIKVM MQTRPKSLPI 780 KLGSNISSAN SDDPNLQVFS FSTIKVATNN FSSENRLGEG GFGPVYKGKL PKGQEIAVKR 840 LSKTSHQGLE EFKNEVTLTA TLQHVNLVKL LGFCTQREEK MLIYECMPNK SLDFYLFDPE 900 GQVLLDWGKR IHIIEGITQG LLYLQEYSRL RIIHRDLKAS NILLDGEMKP KIADFGIARI 960 FQKDENEANT GRIVGTYGYV SPEYVQKGTY SVKSDVYSFG VLLLQIISGK KNTCFYGLDQ 1020 NLHLLEYAYE LWKDGKSMEF MDPSLDDACS SCKLTRCMQV ALLCVQENPA DRPSVLEVDS 1080 MIKNETAAIA TPRRPAFAAK RDEVEADGKS ASGHEIGSVN VTTISQVLPR * 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd02879 | GH18_plant_chitinase_class_V | 7.0e-32 | 23 | 100 | 79 | + The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. | ||
| smart00636 | Glyco_18 | 2.0e-47 | 27 | 296 | 338 | + Glyco_18 domain. | ||
| smart00636 | Glyco_18 | 4.0e-55 | 420 | 714 | 341 | + Glyco_18 domain. | ||
| cd02879 | GH18_plant_chitinase_class_V | 7.0e-69 | 108 | 302 | 199 | + The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. | ||
| cd02879 | GH18_plant_chitinase_class_V | 2.0e-110 | 417 | 720 | 339 | + The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35714.1 | 0 | 1 | 1130 | 1 | 1130 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263709.1 | 0 | 109 | 393 | 174 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263709.1 | 0 | 414 | 1130 | 20 | 764 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263792.1 | 0 | 1 | 393 | 1 | 447 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263792.1 | 0 | 396 | 1130 | 1 | 753 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3aqu_D | 0 | 417 | 723 | 2 | 339 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_D | 0 | 23 | 305 | 2 | 339 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_C | 0 | 417 | 723 | 2 | 339 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_C | 0 | 23 | 305 | 2 | 339 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_B | 0 | 417 | 723 | 2 | 339 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
