| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01007873001 |
| Family | CBM43 |
| Protein Properties | Length: 208 Molecular Weight: 21042.4 Isoelectric Point: 6.4686 |
| Chromosome | Chromosome/Scaffold: 17 Start: 8111068 End: 8115895 |
| Description | plasmodesmata callose-binding protein 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 21 | 102 | 6.3e-34 |
| WCVCKDGLSDAVLQKTLDYACGAGADCGPIHQNGGCYNPNTVRAHCSYAVNSYFQKKGQAQGTCDFAGTASVATSDPSASGC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 208 Download |
| MAALVYMVLI LAMAGHSSAN WCVCKDGLSD AVLQKTLDYA CGAGADCGPI HQNGGCYNPN 60 TVRAHCSYAV NSYFQKKGQA QGTCDFAGTA SVATSDPSAS GCVYPSSISS AGTSTTPSTT 120 TPSTTPSTTT PSTTPSTTTP STTTPSTTSP YTGTPSTGVY GGINSGVGPS GAGINTDISH 180 GGFMLQNTCM FSFFITLWFS GLMLLWG* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-23 | 21 | 91 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-38 | 21 | 104 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92735.1 | 0 | 1 | 207 | 1 | 210 | unknown [Populus trichocarpa] |
| GenBank | ABK93473.1 | 0 | 15 | 204 | 15 | 211 | unknown [Populus trichocarpa] |
| RefSeq | NP_564059.1 | 0 | 1 | 195 | 1 | 182 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | XP_002284112.1 | 0 | 1 | 207 | 1 | 207 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002514663.1 | 0 | 1 | 207 | 1 | 215 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-22 | 21 | 106 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
