| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01008002001 |
| Family | GT47 |
| Protein Properties | Length: 456 Molecular Weight: 51670.6 Isoelectric Point: 9.8057 |
| Chromosome | Chromosome/Scaffold: 17 Start: 6778789 End: 6782640 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 71 | 390 | 0 |
| AHLRAFMYDLPPEFHFGLLGWTGKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNIVRPCSAIRVKNSSQADIIFVPFFSSLSYNRHSR LHGKEKVSVNKMLQDKLVNFLMGQDEWKQLGGKNHLIVAHHPNSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRSNPVADSATFEGRPL LVYFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGASEGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCI FVRASDAVKNGFLLNLLRGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 456 Download |
| MSEKSMLPSR FLFCLITISM FLLILSSLFL LQFSNTSFIP NSVFKLILVN STSKMDALGQ 60 GRRKGCDPNQ AHLRAFMYDL PPEFHFGLLG WTGKANQIWP NVSNPGRIPS YPGGLNLQHS 120 IEYWLTLDLL SSDTPNIVRP CSAIRVKNSS QADIIFVPFF SSLSYNRHSR LHGKEKVSVN 180 KMLQDKLVNF LMGQDEWKQL GGKNHLIVAH HPNSMLDARK KLGSAMFVLA DFGRYPVEIA 240 NIDKDVIAPY KHVLRSNPVA DSATFEGRPL LVYFQGAIYR KDGGAIRQEL YYLLRDEKDV 300 HFTFGSVRGN GINGASEGMA SSKFCLNIAG DTPSSNRLFD AIVSHCVPVI ISDEIELPFE 360 DVLDYSEFCI FVRASDAVKN GFLLNLLRGI KREKWTKMWE RLKEIAHHFE YQYPSQAGDA 420 VDMIWGAVSR KISSIQNKLH RKNRYRRSQI LLKRN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 6.0e-53 | 73 | 390 | 327 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55303.1 | 0 | 1 | 451 | 1 | 452 | AC008263_34 F25A4.34 [Arabidopsis thaliana] |
| RefSeq | XP_002284930.1 | 0 | 1 | 455 | 1 | 455 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002284932.1 | 0 | 48 | 455 | 9 | 416 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002320639.1 | 0 | 73 | 447 | 3 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514760.1 | 0 | 1 | 450 | 1 | 489 | catalytic, putative [Ricinus communis] |
