| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01009700001 |
| Family | CBM43 |
| Protein Properties | Length: 466 Molecular Weight: 49673.3 Isoelectric Point: 7.3546 |
| Chromosome | Chromosome/Scaffold: 18 Start: 10590637 End: 10594953 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 377 | 458 | 2.3e-32 |
| WCVPKSVVSNAQLQANLDYACGQGIDCRPVQPGGACFEPNTVASHAAYAMNLFYQNSARNPWNCDFSQTATLTSKNPSYKGC | |||
| GH17 | 28 | 345 | 0 |
| IGINYGQVADNLPPPSATAKLLQSTSIEKVRLYGADPAIIKALANTGIGIVIGTANGDVPALASDPNFARNWINSNVLPYYPSSKIILITVGNEVMTSGD QNLMTQLLPAMQNLQNALNGASLGGMIKVSTVHSMAVLKQSEPPSSGSFDPSFGDLMKGLLGFNKATGSPFAINPYPYFAYRSDHRPETLAFCLFQPNSG RFDSGTNIKYMNMFDAQVDAVRAALNSMGFKEIEIVVAETGWPYKGDSNEVGPSIENAKAYNGNLISHLRSLVGTPLMPGKSVDTYLFALYDEDLKPGPG SERAFGLFKTDLTMTYDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 466 Download |
| MTTFRCASVA FLFSLLHSVL LARSESFIGI NYGQVADNLP PPSATAKLLQ STSIEKVRLY 60 GADPAIIKAL ANTGIGIVIG TANGDVPALA SDPNFARNWI NSNVLPYYPS SKIILITVGN 120 EVMTSGDQNL MTQLLPAMQN LQNALNGASL GGMIKVSTVH SMAVLKQSEP PSSGSFDPSF 180 GDLMKGLLGF NKATGSPFAI NPYPYFAYRS DHRPETLAFC LFQPNSGRFD SGTNIKYMNM 240 FDAQVDAVRA ALNSMGFKEI EIVVAETGWP YKGDSNEVGP SIENAKAYNG NLISHLRSLV 300 GTPLMPGKSV DTYLFALYDE DLKPGPGSER AFGLFKTDLT MTYDVGLSKG AQNTTPAPAT 360 PKTPATPSPS PSTNGTWCVP KSVVSNAQLQ ANLDYACGQG IDCRPVQPGG ACFEPNTVAS 420 HAAYAMNLFY QNSARNPWNC DFSQTATLTS KNPSYKGCIY PGGRT* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-12 | 2 | 338 | 362 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 7.0e-22 | 376 | 447 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-39 | 376 | 460 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-89 | 28 | 345 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI32582.1 | 0 | 24 | 462 | 55 | 489 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282736.1 | 0 | 1 | 465 | 1 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002284340.1 | 0 | 24 | 462 | 55 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509479.1 | 0 | 21 | 465 | 21 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002510373.1 | 0 | 1 | 463 | 1 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 28 | 345 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 28 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 28 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 28 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 28 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
