| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01009729001 |
| Family | CE8 |
| Protein Properties | Length: 423 Molecular Weight: 46609.2 Isoelectric Point: 9.2999 |
| Chromosome | Chromosome/Scaffold: 18 Start: 10831633 End: 10837616 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 122 | 394 | 0 |
| RVDQSGKGDYQKIQDAIDAVPSNNTEVVFIWVKPGIYREKIVVPADKPFITLSGTKATTTIITWNDTGEIFDSPTFSVLATDFVGRFLTIQNTYGAGAKA VALRVSADRVAFFECRILSHQDTLLDDTGRHFYRNCFIQGDTDFICGNAASLFEKCHLHSLSEESGAITAQRRESPAEDTGFIFLGCKLTGLKSALLGRP WGDYSRVVFAFTYMSNAILPQGWDDWSDTSKQSTAFYGQYKCYGPGAITSKRVEWSRNLTSQEAAPFLTKNLI | |||
| Full Sequence |
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| Protein Sequence Length: 423 Download |
| METPFILRRI GSSVVLSKSL IGRQVRRKSS YSKWTRIGKL PGRQCTVTQC NMDPTSFMDL 60 QLQALIVYST FSLILINKLA EVLATMNVQV YFTVIFLVAL SSSRLSMVGA SPGSLSTAIL 120 MRVDQSGKGD YQKIQDAIDA VPSNNTEVVF IWVKPGIYRE KIVVPADKPF ITLSGTKATT 180 TIITWNDTGE IFDSPTFSVL ATDFVGRFLT IQNTYGAGAK AVALRVSADR VAFFECRILS 240 HQDTLLDDTG RHFYRNCFIQ GDTDFICGNA ASLFEKCHLH SLSEESGAIT AQRRESPAED 300 TGFIFLGCKL TGLKSALLGR PWGDYSRVVF AFTYMSNAIL PQGWDDWSDT SKQSTAFYGQ 360 YKCYGPGAIT SKRVEWSRNL TSQEAAPFLT KNLIGGNSWI RPAPTHFKRA STSISNNANG 420 NT* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 4.0e-93 | 120 | 394 | 293 | + pectinesterase | ||
| PLN02671 | PLN02671 | 7.0e-95 | 123 | 401 | 296 | + pectinesterase | ||
| PLN02665 | PLN02665 | 9.0e-100 | 120 | 404 | 296 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 8.0e-119 | 106 | 402 | 314 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 0 | 109 | 401 | 293 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 0 | 111 | 414 | 36 | 339 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI19714.1 | 0 | 1 | 422 | 1 | 422 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI37658.1 | 0 | 111 | 420 | 54 | 363 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002280496.1 | 0 | 115 | 420 | 1 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281308.1 | 0 | 58 | 422 | 1 | 365 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 123 | 401 | 11 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 123 | 401 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-18 | 118 | 395 | 6 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-18 | 118 | 395 | 6 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-18 | 118 | 395 | 6 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AM722128 | 261 | 112 | 372 | 0 |
| AM721699 | 255 | 112 | 366 | 0 |
| FC069528 | 173 | 109 | 281 | 0 |
| DR952425 | 246 | 75 | 319 | 0 |
| DR952425 | 58 | 284 | 341 | 2.5 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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