| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01009775001 |
| Family | GT4 |
| Protein Properties | Length: 464 Molecular Weight: 52013.5 Isoelectric Point: 10.1201 |
| Chromosome | Chromosome/Scaffold: 18 Start: 11175010 End: 11180097 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 260 | 427 | 7.8e-24 |
| NEDLLFAVINSVSRGKGQDLFLRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVLVQNSQAR GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGKEGVKPLANNIVKLATNVERRLTMGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 464 Download |
| MAKQSTSWLT FHKRWPLLLV ALLSTSTVIV LLIRAASDSC NTNSNTRIQV TSQVETPSNP 60 LRFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVGAEVV WLTIQKPTDS DEVIYSLEHR 120 MLDRGVKVFP AKGQEAIDTA LKADLVVLNT AVAGKWLDSV VKENVPRILP KVLWWIHEMR 180 GHYFKLEYVK HLPYVAGAMI DSHTTAEYWK NRTRERLGIK MPETYVVHLG NSKELMEIAE 240 NNVAKRVLRE HVRESLGVRN EDLLFAVINS VSRGKGQDLF LRSFYQSLQL IKGRKLQVPS 300 IHAVIVGSDM NAQTKFETEL RNFVVENKIQ DQVHFINKTL TVAPYLASID VLVQNSQARG 360 ECFGRITIEA MAFQLPVLGT AAGGTTEIVV NGTTGLLHNV GKEGVKPLAN NIVKLATNVE 420 RRLTMGKRGY ERVKERFLEH HMSERIASVL KEVLKKAENH AFS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| TIGR00072 | hydrog_prot | 6.0e-17 | 275 | 435 | 162 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. |
| cd03798 | GT1_wlbH_like | 2.0e-20 | 253 | 453 | 205 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| COG0438 | RfaG | 1.0e-20 | 161 | 456 | 322 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] |
| cd03808 | GT1_cap1E_like | 1.0e-22 | 275 | 446 | 173 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| cd03801 | GT1_YqgM_like | 5.0e-31 | 80 | 451 | 388 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN73426.1 | 0 | 1 | 454 | 1 | 470 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI19755.1 | 0 | 1 | 463 | 1 | 463 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281084.1 | 0 | 1 | 463 | 1 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327680.1 | 0 | 10 | 463 | 18 | 481 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510442.1 | 0 | 1 | 458 | 1 | 476 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.000000000004 | 329 | 459 | 265 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.000000000004 | 329 | 459 | 265 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.000000000004 | 329 | 459 | 265 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.000000000004 | 329 | 459 | 265 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.000000000004 | 329 | 459 | 265 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
