| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01011459001 |
| Family | CE8 |
| Protein Properties | Length: 317 Molecular Weight: 35475.3 Isoelectric Point: 7.63 |
| Chromosome | Chromosome/Scaffold: 14 Start: 29786095 End: 29790011 |
| Description | pectin methylesterase 31 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 7 | 296 | 0 |
| RVAQDGTGDYRTVQEAIDVVPLCNKCRIVIRVSPGVYKQPVYVPKTKNLITLAGLRPEDTVLTWNNTATKIDHHQAARVIGTGTFGCGTAIVEGEDFIAE NITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQESTGYVFLRC VITGNGGASYTHLGRPWGPFGRVVFLYTWMDACIKHVGWHNWGKAENERSACFYEYRCFGPGSCPSKRVTWARELVDEEAEQFLMHSFID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 317 Download |
| MAARVIRVAQ DGTGDYRTVQ EAIDVVPLCN KCRIVIRVSP GVYKQPVYVP KTKNLITLAG 60 LRPEDTVLTW NNTATKIDHH QAARVIGTGT FGCGTAIVEG EDFIAENITF ENSSPEGSGQ 120 AVAIRVTADR CAFYNCRFLG WQDTLYLHYG KQYLKDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSAGFITAQ SRKSSQESTG YVFLRCVITG NGGASYTHLG RPWGPFGRVV FLYTWMDACI 240 KHVGWHNWGK AENERSACFY EYRCFGPGSC PSKRVTWARE LVDEEAEQFL MHSFIDPDVE 300 RPWLAQRMAL RIPYSA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01095 | Pectinesterase | 1.0e-88 | 8 | 298 | 309 | + Pectinesterase. | ||
| PLN02665 | PLN02665 | 3.0e-91 | 2 | 296 | 303 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-95 | 1 | 296 | 298 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 5.0e-107 | 3 | 296 | 302 | + pectinesterase family protein | ||
| PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
| RefSeq | NP_566842.1 | 0 | 4 | 316 | 5 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 6 | 295 | 9 | 302 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 8 | 277 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 3e-25 | 3 | 295 | 6 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-25 | 3 | 295 | 6 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-25 | 3 | 295 | 6 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY292729 | 314 | 1 | 313 | 0 |
| DY292725 | 298 | 1 | 298 | 0 |
| ES794113 | 290 | 1 | 290 | 0 |
| GR994392 | 306 | 1 | 306 | 0 |
| ES794113 | 33 | 285 | 317 | 0.0004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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