| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01012043001 |
| Family | CBM49 |
| Protein Properties | Length: 616 Molecular Weight: 67994.7 Isoelectric Point: 6.6929 |
| Chromosome | Chromosome/Scaffold: 1 Start: 1887739 End: 1890871 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 524 | 602 | 4.4e-31 |
| EFIHFITNTWTIGRTTYYRHKVIIKNKSQKPITDLKLAIENLSGTLWGLNPCQEKNTYELPQWMKVLQPGSQSSFVYVQ | |||
| GH9 | 29 | 489 | 0 |
| NYGDAMEKSLMFFEAQRSGKLPVNQRVKWRGDSGLRDGLLQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDYRKEITGLNQMGDTLAAIKWGTDYF IKAHTEPDVLWGQVGDGDSDHYCWERAEDMTTPRNAYKLDPNHPGSDLAGETAAAMAAASMAFKLYNSSYSSLLLAHGKQLFSFADRFRGQYDDSIQCAR QYYTSSGYSDELLWAAAWLFRATGDEYYLKYVVDNAVSMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYASTLKKYQAKADFFACACLQKNDGYN VPLTPGGLVYLHEWNNMQYASSAAFLLAVYSDYLSAENAVLKCPDAQVQPYELLNFAKSQADYILGKNPKSMSYLVGYGQKYPVHAHHRGSSIASVAVLH STVGCVEGFESWYHRPEANPNVIYGGLVGGPDKNDGFSDDRSNYEQTEPTLSGGAPLVGLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 616 Download |
| MERSFTHCLV LAIFLGLFAL EATAGASFNY GDAMEKSLMF FEAQRSGKLP VNQRVKWRGD 60 SGLRDGLLQG VDLVGGYYDA GDHVKFGLPM AFTVTMLSWG AIDYRKEITG LNQMGDTLAA 120 IKWGTDYFIK AHTEPDVLWG QVGDGDSDHY CWERAEDMTT PRNAYKLDPN HPGSDLAGET 180 AAAMAAASMA FKLYNSSYSS LLLAHGKQLF SFADRFRGQY DDSIQCARQY YTSSGYSDEL 240 LWAAAWLFRA TGDEYYLKYV VDNAVSMGGT GWAVKEFSWD NKYAGVQILL SKVLMEGRGG 300 AYASTLKKYQ AKADFFACAC LQKNDGYNVP LTPGGLVYLH EWNNMQYASS AAFLLAVYSD 360 YLSAENAVLK CPDAQVQPYE LLNFAKSQAD YILGKNPKSM SYLVGYGQKY PVHAHHRGSS 420 IASVAVLHST VGCVEGFESW YHRPEANPNV IYGGLVGGPD KNDGFSDDRS NYEQTEPTLS 480 GGAPLVGLFS KLQSLIGTSG SHSQKSPAPH HQNTPIIYAD VPVEFIHFIT NTWTIGRTTY 540 YRHKVIIKNK SQKPITDLKL AIENLSGTLW GLNPCQEKNT YELPQWMKVL QPGSQSSFVY 600 VQGGPQAKVS VLSYH* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 10 | 615 | 607 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 11 | 614 | 623 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 23 | 492 | 472 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 9 | 492 | 485 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 29 | 490 | 465 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 1 | 615 | 1 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 28 | 615 | 29 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 34 | 615 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 21 | 615 | 19 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 3 | 615 | 2 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 496 | 2 | 429 | A Chain A, The Crystal Structure Of Este1, A New Thermophilic And Thermostable Carboxylesterase Cloned From A Metagenomic Library |
| PDB | 1ksc_A | 0 | 27 | 496 | 2 | 429 | A Chain A, The Crystal Structure Of Este1, A New Thermophilic And Thermostable Carboxylesterase Cloned From A Metagenomic Library |
| PDB | 1ks8_A | 0 | 27 | 496 | 2 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 27 | 554 | 3 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 27 | 554 | 3 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
