| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01012194001 |
| Family | GT35 |
| Protein Properties | Length: 934 Molecular Weight: 105818 Isoelectric Point: 5.9677 |
| Chromosome | Chromosome/Scaffold: 1 Start: 649077 End: 654363 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT35 | 170 | 927 | 0 |
| ALRKLGHNLEDVASQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIVRNDVSYPVKFYGKVIEGP DGKKEWIGGEDITAVAYDVPIPGYKTKTTINLRLWSTKLASEAFDLQAFNTGDHAKANKAQKDAEKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDII RRFERRSGGPVNWENFPEKVAVQMNDTHPTLCIPELIRILMDVKGLSWKEAWDITQRTVAYTNHTVLPEALEKWSLNLLKELLPRHVQIIEMIDEELIQT ITSEYGVEDLDLLQQKLKQMRILDNVELPSSVLELLVKSEEKGPAVDTIEETETSNEGIKPKMVRMANLCVVGGRAVNGVAEIHSEIVKTDVFNDFYGLW PEKFQNKTNGVTPRRWIRFCNPDLSNIITKWTGTEDWVINTEKLAELRKFADNEDLQSEWREAKRRNKIKVVSFLKEKTGYLVSPDAMFDVQVKRIHEYK RQLLNIMGIVYRYKKMKEMSPDERKANFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPDIGDLLKVVFVPDYNVSVAEVLIPGSELSQHISTAG MEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEDNFFLFGARADEIAGLRKERAEGKFVPDPRFEEVKAYVRSGVFGPYNYEELMGSLEGNEGYGRAD YFLVGKDFPSYIECQEKVDEAYRDQKKWTKMSILNTAGSYKFSSDRTIHEYARHIWMI | |||
| Full Sequence |
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| Protein Sequence Length: 934 Download |
| MAASPFSATS TQTSPFSHSN SFSSFLGFKC RSRHSWPFFI RTSSTWHSRR SLSIIRSVAS 60 NQKQTLKDPP TQEDGLDSFA PDSASIASSI KYHSEFTPLF SPGRFELPKA YLATAQSVQD 120 MLIINWNATY DYYEKMNVKQ AYYLSMEYLQ GRALLNAIGN LELSGPYAEA LRKLGHNLED 180 VASQEPDAAL GNGGLGRLAS CFLDSLATLN YPAWGYGLRY KYGLFKQLIT KDGQEEVAEN 240 WLEMGNPWEI VRNDVSYPVK FYGKVIEGPD GKKEWIGGED ITAVAYDVPI PGYKTKTTIN 300 LRLWSTKLAS EAFDLQAFNT GDHAKANKAQ KDAEKICYVL YPGDESIEGK TLRLKQQYTL 360 CSASLQDIIR RFERRSGGPV NWENFPEKVA VQMNDTHPTL CIPELIRILM DVKGLSWKEA 420 WDITQRTVAY TNHTVLPEAL EKWSLNLLKE LLPRHVQIIE MIDEELIQTI TSEYGVEDLD 480 LLQQKLKQMR ILDNVELPSS VLELLVKSEE KGPAVDTIEE TETSNEGIKP KMVRMANLCV 540 VGGRAVNGVA EIHSEIVKTD VFNDFYGLWP EKFQNKTNGV TPRRWIRFCN PDLSNIITKW 600 TGTEDWVINT EKLAELRKFA DNEDLQSEWR EAKRRNKIKV VSFLKEKTGY LVSPDAMFDV 660 QVKRIHEYKR QLLNIMGIVY RYKKMKEMSP DERKANFVPR VCIFGGKAFA TYVQAKRIVK 720 FITDVGATVN HDPDIGDLLK VVFVPDYNVS VAEVLIPGSE LSQHISTAGM EASGTSNMKF 780 AMNGCILIGT LDGANVEIRE EVGEDNFFLF GARADEIAGL RKERAEGKFV PDPRFEEVKA 840 YVRSGVFGPY NYEELMGSLE GNEGYGRADY FLVGKDFPSY IECQEKVDEA YRDQKKWTKM 900 SILNTAGSYK FSSDRTIHEY ARHIWMIDPI VIP* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 87 | 925 | 848 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| TIGR02093 | P_ylase | 0 | 90 | 927 | 846 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00343 | Phosphorylase | 0 | 170 | 929 | 765 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| COG0058 | GlgP | 0 | 111 | 929 | 824 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
| PRK14986 | PRK14986 | 0 | 113 | 930 | 823 | + glycogen phosphorylase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27267.1 | 0 | 1 | 933 | 1 | 933 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | P53535 | 0 | 59 | 933 | 54 | 974 | PHSL2_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-2; Flags: Precursor |
| RefSeq | XP_002274575.1 | 0 | 1 | 933 | 1 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316098.1 | 0 | 13 | 933 | 3 | 953 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512108.1 | 0 | 1 | 933 | 1 | 973 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ygp_B | 0 | 110 | 930 | 68 | 878 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 1ygp_A | 0 | 110 | 930 | 68 | 878 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 1z8d_A | 0 | 111 | 929 | 53 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2gj4_A | 0 | 111 | 929 | 41 | 818 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 3cem_B | 0 | 84 | 929 | 3 | 807 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797178 | 401 | 534 | 934 | 0 |
| HO778303 | 401 | 534 | 934 | 0 |
| HO778303 | 385 | 110 | 494 | 0 |
| HO613954 | 499 | 447 | 934 | 0 |
| HO778303 | 69 | 49 | 112 | 0.0000000007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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