| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01012709001 |
| Family | AA1 |
| Protein Properties | Length: 541 Molecular Weight: 60738.1 Isoelectric Point: 9.6944 |
| Chromosome | Chromosome/Scaffold: 10 Start: 866241 End: 871411 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 44 | 495 | 0 |
| QQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWSGLQQRRNSWQDGMYGTNCPIPPGRNMTYALQVKDQIGSFFYFPSLAFHKAAGGFGGIRIL SRPRIPVPFPAPSGDFTVLAGDWFKRDHAVLKGILDRGHNLPFPDGLLINGRGWNGYTFQVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEVEGSHTL QNTYSALDIHLGQSYSVLVTADQPPQDYYVVVSSRFTSPVLTTTAILHYSWSTKGLSGPPPGGPTIQVDWSLNQARSIRWNLTASGPRPNPQGSYHYGLI TTSRTITLANSAPMINGKQRYAVNSVSFVPASTPLKLADYFKIPGVFNLGSIPSYPTWGNGYLQTSVMHADFRSYVEIVFQNWEDIVQSWHIDGYSFFVM GMDGGQWTPASRASYNLRDTVARCTVQVYPKAWTAIYMALDNVGMWNVRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 541 Download |
| MRDLCFFTIF ILGLLLPGVH GEDPYRFYTW KVTYGDIYPL GVKQQGILIN GQFPGPQIDA 60 VTNDNLIISV YNYLREPFLI SWSGLQQRRN SWQDGMYGTN CPIPPGRNMT YALQVKDQIG 120 SFFYFPSLAF HKAAGGFGGI RILSRPRIPV PFPAPSGDFT VLAGDWFKRD HAVLKGILDR 180 GHNLPFPDGL LINGRGWNGY TFQVDQGKTY RFRISNVGLT TSINFRIQGH KMKLVEVEGS 240 HTLQNTYSAL DIHLGQSYSV LVTADQPPQD YYVVVSSRFT SPVLTTTAIL HYSWSTKGLS 300 GPPPGGPTIQ VDWSLNQARS IRWNLTASGP RPNPQGSYHY GLITTSRTIT LANSAPMING 360 KQRYAVNSVS FVPASTPLKL ADYFKIPGVF NLGSIPSYPT WGNGYLQTSV MHADFRSYVE 420 IVFQNWEDIV QSWHIDGYSF FVMGMDGGQW TPASRASYNL RDTVARCTVQ VYPKAWTAIY 480 MALDNVGMWN VRSENWARQY LGQQFYLRVF SPANSWRDEL PIPKNALLCG RASGRHTRPL 540 * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 8 | 537 | 532 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 1 | 537 | 537 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 19 | 537 | 522 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 9 | 534 | 538 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 24 | 533 | 521 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 2 | 540 | 5 | 544 | unknown [Populus trichocarpa] |
| RefSeq | XP_002272880.1 | 0 | 1 | 540 | 1 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 2 | 540 | 5 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 16 | 540 | 17 | 541 | multicopper oxidase, putative [Ricinus communis] |
| RefSeq | XP_002524823.1 | 0 | 5 | 535 | 10 | 538 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 530 | 4 | 539 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1asq_A | 0 | 26 | 530 | 4 | 539 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1asp_B | 0 | 26 | 530 | 4 | 539 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1asp_A | 0 | 26 | 530 | 4 | 539 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1aso_B | 0 | 26 | 530 | 4 | 539 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
