y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01012806001 |
Family | GT47 |
Protein Properties | Length: 863 Molecular Weight: 98505.2 Isoelectric Point: 7.4194 |
Chromosome | Chromosome/Scaffold: 11 Start: 5557470 End: 5575151 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 531 | 813 | 0 |
EKRFKIWAYREGDQPLMHDGPSNGIYAIEGQFMDDIESGKSHFLARRPDEANAFYIPMSLTKIVHFIYEPPHYYGKWIPRLVTDYINFVADKYPYWNRSK GADHFLVSCHDWAPDVSALKPDLYKHFIRALCNANTSERFHPIRDISIPEINIPRGKLGPPHLDQPPNKRPILAFFAGGAHGYVRSVLFKYWKEKDDEVQ VFERLPGNRNYSKSMGDSKFCLCPSGYEVASPRIVEAIAAGCVPMIICDHYSLPFSDVLDWSKFSIYITSDKIPEIKKILKAV |
Full Sequence |
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Protein Sequence Length: 863 Download |
MVNLKYFCDL GFFGSLPMCL NNLTSLRLLD LSRNDFHGTI PSSLFSNMKS LEYISLSYNH 60 FEGSIYFGSL FNHSRLEVFE LSSNNNRVVP SFLLSQHDLR VVDLSYNHMT GDVPTWLLDN 120 NTKLEYLSFE SNSLTGHMMM GCISLEVLKL SNNSLHDTLP TKSNLTRLSS LSLDNNDLWG 180 EISRGFLNSS FLLLLDVSSN SLMGQIPDWI GDFLALETLI LSRNYLDGVV PTGFCKLNEL 240 RFLDLSHNKI GPTLPLCANL TNMKFLHLES NELIGPIPHV LVEATSLVSL NLRDNKLSSL 300 IPLWISLLSK LRVLLLKGNQ LEDSIPLHLS ESYMGNILYF MSGLDLSGNE LTGPIPPKIG 360 NLKLNFLTVF TVAHNNLSGK TPERKFQFAT FEQSSYEGNP LLCGLPLERS CTPTSAPPAV 420 KPPVSDNKEN SSWETIFLWS FGGSYGVAFL GIIVFLYLNS YYRELFFYFI GEHEKMSRLE 480 RIEEGLARAR AEIRRAIRTR NYTSEKDEAF IPRGDVYRNP YAFHQSHIEM EKRFKIWAYR 540 EGDQPLMHDG PSNGIYAIEG QFMDDIESGK SHFLARRPDE ANAFYIPMSL TKIVHFIYEP 600 PHYYGKWIPR LVTDYINFVA DKYPYWNRSK GADHFLVSCH DWAPDVSALK PDLYKHFIRA 660 LCNANTSERF HPIRDISIPE INIPRGKLGP PHLDQPPNKR PILAFFAGGA HGYVRSVLFK 720 YWKEKDDEVQ VFERLPGNRN YSKSMGDSKF CLCPSGYEVA SPRIVEAIAA GCVPMIICDH 780 YSLPFSDVLD WSKFSIYITS DKIPEIKKIL KAVPTETYLE MQKRVKQVQR HFAINRPARP 840 YDMLHMILHS VWLRRLNVRL PS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 3.0e-16 | 36 | 278 | 277 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-19 | 72 | 383 | 316 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 4.0e-29 | 38 | 406 | 396 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-35 | 38 | 404 | 372 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam03016 | Exostosin | 3.0e-62 | 530 | 813 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN73458.1 | 0 | 530 | 862 | 1 | 333 | hypothetical protein [Vitis vinifera] |
EMBL | CBI25528.1 | 0 | 1 | 862 | 1 | 862 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25529.1 | 0 | 476 | 862 | 1 | 388 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266490.1 | 0 | 476 | 862 | 1 | 387 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266646.1 | 0 | 500 | 862 | 25 | 387 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 4e-30 | 12 | 416 | 327 | 750 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3rj0_A | 3e-23 | 23 | 384 | 147 | 530 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3rj0_A | 6e-21 | 14 | 368 | 234 | 568 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3rj0_A | 4e-16 | 6 | 280 | 397 | 720 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3rj0_A | 0.000000000002 | 144 | 383 | 98 | 358 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |