| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01013124001 |
| Family | AA3 |
| Protein Properties | Length: 298 Molecular Weight: 32290.5 Isoelectric Point: 6.3078 |
| Chromosome | Chromosome/Scaffold: 2 Start: 7997844 End: 7999451 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 6 | 291 | 6.00036e-42 |
| YYDYIVVGGGTAGCPLAATLSENFRVLVLERGGVPYTNPNLMSQDGFLTSLMEADPYDSPAQTFTSEDGVANARGRVLGGSSAINAGFYSRADEDFYKKS GLKWDLHIVNQSYEWVERAVVFRPELKNWQSAVRDGLLEAGVDPYRGFILDHAVGTKIGGSTFDSSGRRHTAADLLGYAKATNIRVAVHASVERILLAPT SALFVGPALPVNQSNDAQMAEFCHRTVSTIWHYHGGCIVGKVVDSDHQVLGIDALRVVDGSTFNVSPGTNPQATLMMLGRYIGIKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 298 Download |
| MPPEDYYDYI VVGGGTAGCP LAATLSENFR VLVLERGGVP YTNPNLMSQD GFLTSLMEAD 60 PYDSPAQTFT SEDGVANARG RVLGGSSAIN AGFYSRADED FYKKSGLKWD LHIVNQSYEW 120 VERAVVFRPE LKNWQSAVRD GLLEAGVDPY RGFILDHAVG TKIGGSTFDS SGRRHTAADL 180 LGYAKATNIR VAVHASVERI LLAPTSALFV GPALPVNQSN DAQMAEFCHR TVSTIWHYHG 240 GCIVGKVVDS DHQVLGIDAL RVVDGSTFNV SPGTNPQATL MMLGRYIGIK ITKERMR* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2303 | BetA | 4.0e-9 | 216 | 285 | 75 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| COG2303 | BetA | 2.0e-14 | 7 | 207 | 239 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 4.0e-16 | 189 | 284 | 106 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| PLN02785 | PLN02785 | 2.0e-37 | 218 | 296 | 80 | + Protein HOTHEAD | ||
| PLN02785 | PLN02785 | 3.0e-90 | 7 | 201 | 195 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33859.1 | 0 | 1 | 297 | 1 | 297 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277531.1 | 0 | 1 | 208 | 44 | 251 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277531.1 | 0 | 209 | 297 | 460 | 548 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311915.1 | 0 | 1 | 206 | 14 | 219 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002311915.1 | 3e-38 | 209 | 295 | 431 | 517 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 4 | 203 | 24 | 223 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 3gdp_B | 6e-28 | 210 | 295 | 432 | 517 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 3gdp_A | 0 | 4 | 203 | 24 | 223 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 3gdp_A | 6e-28 | 210 | 295 | 432 | 517 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 3gdn_B | 0 | 4 | 203 | 24 | 223 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| amygdalin and prunasin degradation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
| vicianin bioactivation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX668479 | 207 | 1 | 207 | 0 |
| DY277301 | 191 | 1 | 191 | 0 |
| FC898498 | 186 | 1 | 186 | 0 |
| GO953296 | 187 | 1 | 187 | 0 |
| JG640167 | 196 | 1 | 196 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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