| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01013272001 |
| Family | GH14 |
| Protein Properties | Length: 466 Molecular Weight: 51700.8 Isoelectric Point: 8.2909 |
| Chromosome | Chromosome/Scaffold: 2 Start: 5804013 End: 5807077 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 57 | 440 | 0 |
| FVMLPLDTVSFGGNLNKPRAMNASLMALKSSGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVYSDYMRSFHNRFKDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMR ASLEASADAVGKKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGDRILAAAEGIFQGTGAKLSGKVAGIHWHYKTRSHAAEL TAGYYNTRNHDGYLPIARMMGKYGVVLNFTCMEMKDREQQEHANCSPEGLVRQVKMATKTAGTELAGENALERYDSSAYAQCDS | |||
| Full Sequence |
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| Protein Sequence Length: 466 Download |
| MALTLRSSTS FINPKDTKGL KTPDISSSIF FTPSKPPCIL HGLPTPHNKN GSRVPVFVML 60 PLDTVSFGGN LNKPRAMNAS LMALKSSGVE GVMVDAWWGL VEKDGPMKYN WEGYAELVQM 120 VQRHGLKLQV VMSFHQCGGN VGDSCSIPLP PWVLEEISKN TDLVYTDRSG RRNPEYISLG 180 CDSIPVLRGR TPIQVYSDYM RSFHNRFKDY LGGVIAEIQV GMGPCGELRY PSYPESNGTW 240 RFPGIGEFQC YDKYMRASLE ASADAVGKKD WGRSGPQDAG HYNQFPEDTG FFRRDGTWTT 300 EYGQFFLKWY SGKLLEHGDR ILAAAEGIFQ GTGAKLSGKV AGIHWHYKTR SHAAELTAGY 360 YNTRNHDGYL PIARMMGKYG VVLNFTCMEM KDREQQEHAN CSPEGLVRQV KMATKTAGTE 420 LAGENALERY DSSAYAQCDS SGTDLYIGFI KKKKDVAKTM EAALV* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-142 | 54 | 435 | 386 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 3.0e-166 | 57 | 449 | 404 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 1.0e-177 | 43 | 437 | 398 | + beta-amylase | ||
| PLN02803 | PLN02803 | 0 | 1 | 465 | 549 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 51 | 437 | 388 | + beta-amylase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 465 | 1 | 543 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI33977.1 | 0 | 1 | 465 | 1 | 465 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 465 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 465 | 1 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 465 | 1 | 548 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 54 | 438 | 12 | 394 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1q6c_A | 0 | 54 | 438 | 12 | 394 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 54 | 438 | 12 | 394 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1uko_D | 0 | 54 | 438 | 12 | 394 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 54 | 438 | 12 | 394 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 483 | 1 | 442 | 0 |
| HO781538 | 363 | 40 | 401 | 0 |
| HO794833 | 350 | 92 | 441 | 0 |
| CF204929 | 261 | 145 | 405 | 0 |
| ES830803 | 335 | 87 | 419 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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