y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01013328001 |
Family | GH3 |
Protein Properties | Length: 752 Molecular Weight: 80931.1 Isoelectric Point: 7.0694 |
Chromosome | Chromosome/Scaffold: 12 Start: 12140487 End: 12144524 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 86 | 336 | 0 |
ASVSRLGIPKYEWWSEALHGVSYVGPGTHFNSVVPGATSFPQVILTAASFNASLFEAIGKAVSTEARAMYNVGLAGLTFWSPNVNIFRDPRWGRGQETPG EDPLLSSKYASGYVRGLQQSDDGSPDRLKVAACCKHYTAYDLDNWKGVDRFHFNAVVTKQDMDDTFQPPFKSCVIDGNVASVMCSYNQVNGKPACADPDL LSGIVRGEWKLNGYIVSDCDSVDVFYNSQHYTKTPEEAAAKAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 752 Download |
MASVINSAPK VTVFLCFLSC FSHFLSSPKW VLAQSSPVFA CDVENNPTLG QFGFCNTSLE 60 TAARVADLVK RLTLEEKIGF LVNSAASVSR LGIPKYEWWS EALHGVSYVG PGTHFNSVVP 120 GATSFPQVIL TAASFNASLF EAIGKAVSTE ARAMYNVGLA GLTFWSPNVN IFRDPRWGRG 180 QETPGEDPLL SSKYASGYVR GLQQSDDGSP DRLKVAACCK HYTAYDLDNW KGVDRFHFNA 240 VVTKQDMDDT FQPPFKSCVI DGNVASVMCS YNQVNGKPAC ADPDLLSGIV RGEWKLNGYI 300 VSDCDSVDVF YNSQHYTKTP EEAAAKAILA GLDLNCGSFL GQHTEAAVKG GLVDESAVDK 360 AVSNNFATLM RLGFFDGNPS KAIYGKLGPK DVCTSEHQEL AREAARQGIV LLKNSKGSLP 420 LSPTAIKTLA VIGPNANVTK TMIGNYEGTP CKYTTPLQGL TALVATTYLP GCSNVACGTA 480 QIDEAKKIAA AADATVLIVG IDQSIEAEGR DRVNIQLPGQ QPLLITEVAK ASKGNVILVV 540 MSGGGFDISF AKNDDKITSI LWVGYPGEAG GAAIADVIFG FYNPSGRLPM TWYPQSYVDK 600 VPMTNMNMRP DPASGYPGRT YRFYTGETIY TFGDGLSYTQ FNHHLSVDAV QESCQNLVFD 660 IHLRVNNAGN ISGSHTVFLF SSPPSVHNSP QKHLLGFEKV FVTAKAKALV RFKVDVCKDL 720 SIVDELGTRK VALGLHVLHV GNLKHSLNVR I* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-53 | 409 | 639 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 5.0e-61 | 83 | 473 | 397 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-67 | 73 | 364 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-75 | 29 | 735 | 804 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 33 | 751 | 761 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 1 | 751 | 1 | 774 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40687.1 | 0 | 1 | 751 | 1 | 751 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 1 | 751 | 193 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 32 | 751 | 26 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002513707.1 | 0 | 1 | 751 | 1 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 123 | 714 | 91 | 696 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 3u48_A | 0 | 123 | 714 | 91 | 696 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 3u4a_B | 0 | 123 | 714 | 91 | 696 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 3u4a_A | 0 | 123 | 714 | 91 | 696 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 2x41_A | 7.00005e-41 | 64 | 699 | 3 | 658 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |