| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01013347001 |
| Family | GH3 |
| Protein Properties | Length: 462 Molecular Weight: 50715.5 Isoelectric Point: 6.6282 |
| Chromosome | Chromosome/Scaffold: 12 Start: 12498442 End: 12502752 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 8 | 183 | 0 |
| GLTFWSPNVNIFRDPRWGRGQETPGEDPLLSSKYASGYVRGLQQSDDGSPDRLKIAACCKHYTAYDLDNWKGVDRFHFNAVVTKQDMDDTFQPPFKSCVI DGNVASVMCSYNQVNGKPACADPDLLSGIVRGEWKLNGYIVSDCDSVDVFYNSQHYTKTPEEAAAKAILAGLDLNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 462 Download |
| MYNVGLAGLT FWSPNVNIFR DPRWGRGQET PGEDPLLSSK YASGYVRGLQ QSDDGSPDRL 60 KIAACCKHYT AYDLDNWKGV DRFHFNAVVT KQDMDDTFQP PFKSCVIDGN VASVMCSYNQ 120 VNGKPACADP DLLSGIVRGE WKLNGYIVSD CDSVDVFYNS QHYTKTPEEA AAKAILAGLD 180 LNCGSFLGQH TEAAVKGGLV DESAVDKAVS NNFATLMRLG FFDGNPSKAI YGKLGPKDVC 240 TLEHQELARE AARQGIMLLK NSKGSLPLSP TAIKTLAIIG PNANVTKTMI GNYEGTPCKY 300 TTPLQGLMAL VATTYLSGCS NVACSTAQID EAKKIAAAAD ATVLIVGIDQ SIEAEGRDRV 360 NIQLPGQQPL LITEHPVGRL PWWSCHSRCD LWFLQSKWKA THDMVSSVVC RQGSDDKYEY 420 ETRSCQWLYW SDLPVLHWGN HLHIWRWTKL HPVQPPPCSS T* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 6.0e-18 | 256 | 374 | 126 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 6.0e-43 | 12 | 312 | 313 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 8.0e-52 | 12 | 320 | 314 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-54 | 12 | 211 | 203 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PLN03080 | PLN03080 | 2.0e-159 | 1 | 372 | 380 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39114.1 | 0 | 1 | 374 | 154 | 527 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI40687.1 | 0 | 1 | 374 | 154 | 527 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI40698.1 | 0 | 1 | 461 | 1 | 461 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264183.1 | 0 | 1 | 374 | 346 | 719 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002268626.1 | 0 | 1 | 374 | 148 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 3e-34 | 12 | 377 | 128 | 515 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 3u48_A | 3e-34 | 12 | 377 | 128 | 515 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 3u4a_B | 1e-33 | 12 | 377 | 128 | 515 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 3u4a_A | 1e-33 | 12 | 377 | 128 | 515 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 4i3g_B | 9e-29 | 14 | 309 | 151 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT556104 | 293 | 77 | 369 | 0 |
| EX688471 | 278 | 28 | 305 | 0 |
| EL371570 | 285 | 9 | 293 | 0 |
| HO799547 | 321 | 53 | 373 | 0 |
| JG725595 | 256 | 71 | 326 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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