| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01013489001 |
| Family | GH2 |
| Protein Properties | Length: 1115 Molecular Weight: 126083 Isoelectric Point: 5.91 |
| Chromosome | Chromosome/Scaffold: 13 Start: 1608314 End: 1670232 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 87 | 980 | 0 |
| VKSLSGYWKFYLAPGPTSVPMNFYDSSFEDSTWETLPVPSNWQMHGFDRPIYTNIVYPFPLDPPHVPTENPTGCYRTVFHIPHEWKGRRILLHFEAVDSA FFAWINGVPVGYSQDSRLPAEFEITDYCHPCGSNKKNVLAVQVFRWSDGSYLEDQDQWWLSGIHRDVLLLAKPQVYIEDYFFKSNLGENFSYADIQVEVK IDNSLETSKDSILNKFSIEAELFDSAKWHDSDEYCDLHSSSVAHMELDPSSSTAIFGFLGYVLVGKLESPKLWSAEQPYLYTLVVILKDEFGKVVDCESC QVGIRQVSKAPKQLLVNGHPVILRGVNRHEHHPRLGKTNMESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFYDSQHLKN PTLESSWASSMMDRVISMVERDKNHACIISWSLGNESGYGPNHSALAGWIRGRDSSRLLHYEGGGARTPSTDIVCPMYMRVWDIVKIAKDPTEMRPLILC EYSHSMGNSNGNIQEYWEAIDNTFGLQGGFIWDWVDQGLLKVGADGAKHWAYGGDFGDIPNDLNFCLNGITWPDRTLHPAVHEVKYVYQPIKISLSESTL KITNTHFYETTKAMEFSWTVCGDGCKLGSGTLSLPIIEPQSSYSIEFESGPWYSLWASSSAEEHFLTITAKLLQPTRWVEAGHVISSTQILLPAKREFVP HVIKNKDAPVPGEILGNTIRFYQQNVWEIQFNAQTGTIESWKVGGVTVMNKGIFPCFWRAPTDNDNGGGAKSYVSKWKAAHLDNLSFITESCSVQNITDH PVKLAVVYLGIPKGEENSLSRSENPKVLLKVDITYTVYGSGDIIMECNVHPCSDLPPLPRVGVEFQLEKTIDQIKWYGKGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1115 Download |
| MASLVAQLAF PSDYNRRVWE DPSFIKWRKK DAHVSLHCHD TVEGSLRYWY ERNKVDFIAS 60 SSAVWNDDAV VGALDCAAFW VKGLPFVKSL SGYWKFYLAP GPTSVPMNFY DSSFEDSTWE 120 TLPVPSNWQM HGFDRPIYTN IVYPFPLDPP HVPTENPTGC YRTVFHIPHE WKGRRILLHF 180 EAVDSAFFAW INGVPVGYSQ DSRLPAEFEI TDYCHPCGSN KKNVLAVQVF RWSDGSYLED 240 QDQWWLSGIH RDVLLLAKPQ VYIEDYFFKS NLGENFSYAD IQVEVKIDNS LETSKDSILN 300 KFSIEAELFD SAKWHDSDEY CDLHSSSVAH MELDPSSSTA IFGFLGYVLV GKLESPKLWS 360 AEQPYLYTLV VILKDEFGKV VDCESCQVGI RQVSKAPKQL LVNGHPVILR GVNRHEHHPR 420 LGKTNMESCM VKDLVLMKQN NINAVRNSHY PQHPRWYELC DLFGMYMIDE ANIETHGFYD 480 SQHLKNPTLE SSWASSMMDR VISMVERDKN HACIISWSLG NESGYGPNHS ALAGWIRGRD 540 SSRLLHYEGG GARTPSTDIV CPMYMRVWDI VKIAKDPTEM RPLILCEYSH SMGNSNGNIQ 600 EYWEAIDNTF GLQGGFIWDW VDQGLLKVGA DGAKHWAYGG DFGDIPNDLN FCLNGITWPD 660 RTLHPAVHEV KYVYQPIKIS LSESTLKITN THFYETTKAM EFSWTVCGDG CKLGSGTLSL 720 PIIEPQSSYS IEFESGPWYS LWASSSAEEH FLTITAKLLQ PTRWVEAGHV ISSTQILLPA 780 KREFVPHVIK NKDAPVPGEI LGNTIRFYQQ NVWEIQFNAQ TGTIESWKVG GVTVMNKGIF 840 PCFWRAPTDN DNGGGAKSYV SKWKAAHLDN LSFITESCSV QNITDHPVKL AVVYLGIPKG 900 EENSLSRSEN PKVLLKVDIT YTVYGSGDII MECNVHPCSD LPPLPRVGVE FQLEKTIDQI 960 KWYGKGPFEC YPDRKAAAHV GVYEQNVGDM HVPYIVPVEC SGRADVRWVT FQNKDGFGIY 1020 ASMYGSSPPM QMNASYYSTA ELERATHKEK LIKGDDIEVH LDHKHMGLGG DDSWSPCVHE 1080 KYLIPAVPYS FSIRLSPITA AITGYDIYKS QLQN* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 5.0e-95 | 813 | 1095 | 284 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 1.0e-105 | 397 | 679 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 8.0e-163 | 87 | 978 | 900 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 1 | 1097 | 1125 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 88 | 1101 | 1019 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 1114 | 1 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 1114 | 1 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1114 | 1 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1114 | 1 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1114 | 1 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 87 | 1093 | 51 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 87 | 1093 | 51 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 87 | 1093 | 51 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 87 | 1093 | 51 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz2_D | 0 | 87 | 1093 | 51 | 1018 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804274 | 385 | 129 | 511 | 0 |
| EE106887 | 263 | 735 | 997 | 0 |
| ES794486 | 356 | 452 | 807 | 0 |
| EL444301 | 297 | 439 | 735 | 0 |
| HO804274 | 50 | 502 | 550 | 0.00000000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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